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  5. AT1G12560

AT1G12560 (ATEXP7, EXPA7, ATHEXP...)


Aliases : ATEXP7, EXPA7, ATHEXP ALPHA 1.26, ATEXPA7, EXP7

Description : expansin A7


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree ,
OG_06_0006420 (SeedPlants) Phylogenetic Tree(s): OG_06_0006420_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G12560
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00270650 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AMTR_s00010p00264980 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AMTR_s00022p00153780 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00077p00063420 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00140p00077570 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AMTR_s00168p00074090 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.04 Archaeplastida
AT1G69530 ATEXPA1, EXP1,... expansin A1 0.03 Archaeplastida
AT2G28950 EXPA6, ATEXP6,... expansin A6 0.05 Archaeplastida
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.08 Archaeplastida
AT3G15370 ATHEXP ALPHA... expansin 12 0.03 Archaeplastida
AT3G55500 EXPA16, ATHEXP... expansin A16 0.02 Archaeplastida
AT4G01630 ATHEXP ALPHA... expansin A17 0.08 Archaeplastida
AT5G05290 EXPA2, ATHEXP... expansin A2 0.04 Archaeplastida
AT5G39270 EXPA22, ATEXP22,... expansin A22 0.04 Archaeplastida
AT5G39280 ATHEXP ALPHA ... expansin A23 0.04 Archaeplastida
AT5G39300 ATEXPA25,... expansin A25 0.04 Archaeplastida
GSVIVT01000214001 No alias Phytohormones.signalling peptides.NCRP... 0.04 Archaeplastida
GSVIVT01008762001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01011437001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01024572001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01025509001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01028474001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01029411001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
GSVIVT01032681001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01033691001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.07 Archaeplastida
Gb_01500 No alias alpha-class expansin 0.05 Archaeplastida
Gb_01502 No alias alpha-class expansin 0.04 Archaeplastida
Gb_01505 No alias alpha-class expansin 0.02 Archaeplastida
Gb_01506 No alias Expansin-A8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_06127 No alias alpha-class expansin 0.03 Archaeplastida
Gb_09118 No alias alpha-class expansin 0.03 Archaeplastida
Gb_20678 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os01g14650.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os01g14660.1 No alias alpha-class expansin 0.11 Archaeplastida
LOC_Os01g16770.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os01g60770.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g06000.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g06010.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os03g06020.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os03g06050.1 No alias alpha-class expansin 0.07 Archaeplastida
LOC_Os03g21820.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os03g25990.1 No alias alpha-class expansin 0.06 Archaeplastida
LOC_Os03g31480.1 No alias alpha-class expansin 0.07 Archaeplastida
LOC_Os03g60720.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os04g15840.1 No alias alpha-class expansin 0.08 Archaeplastida
LOC_Os05g19570.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os05g19600.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os05g39990.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os06g01920.1 No alias alpha-class expansin 0.11 Archaeplastida
LOC_Os08g44790.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os10g30330.1 No alias alpha-class expansin 0.06 Archaeplastida
LOC_Os10g30340.1 No alias alpha-class expansin 0.11 Archaeplastida
LOC_Os10g39110.1 No alias alpha-class expansin 0.12 Archaeplastida
LOC_Os12g36040.1 No alias alpha-class expansin 0.02 Archaeplastida
MA_10020g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_100868g0010 No alias alpha-class expansin 0.1 Archaeplastida
MA_104065g0020 No alias alpha-class expansin 0.02 Archaeplastida
MA_10429288g0020 No alias Expansin-A2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_114349g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_130258g0010 No alias alpha-class expansin 0.08 Archaeplastida
MA_14588g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_18265g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_184474g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_19117g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_200461g0010 No alias Expansin-A8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_274624g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_275115g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_30127g0010 No alias alpha-class expansin 0.05 Archaeplastida
MA_3618g0010 No alias Expansin-A15 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_36587g0010 No alias alpha-class expansin 0.05 Archaeplastida
MA_40671g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_45587g0020 No alias alpha-class expansin 0.08 Archaeplastida
MA_6644365g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_70880g0010 No alias alpha-class expansin 0.06 Archaeplastida
MA_792493g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_8784268g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g22700.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp1g22720.1 No alias Expansin-A4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp1g22730.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp1g22740.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp1g24230.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp1g26350.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp2g18600.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp2g18610.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp3g06900.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g09650.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g09760.1 No alias alpha-class expansin 0.06 Archaeplastida
Mp3g09770.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g10160.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g12280.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp3g22690.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g24470.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp5g01930.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp5g20420.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp5g20430.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp8g18860.1 No alias alpha-class expansin 0.04 Archaeplastida
Pp3c11_12000V3.1 No alias expansin A14 0.03 Archaeplastida
Pp3c12_4560V3.1 No alias expansin A9 0.04 Archaeplastida
Pp3c13_20360V3.1 No alias expansin A9 0.04 Archaeplastida
Pp3c14_18030V3.1 No alias expansin A14 0.04 Archaeplastida
Pp3c18_19660V3.1 No alias expansin A9 0.03 Archaeplastida
Pp3c18_19720V3.1 No alias expansin A1 0.05 Archaeplastida
Pp3c20_5780V3.1 No alias expansin A15 0.02 Archaeplastida
Pp3c21_1850V3.1 No alias expansin A1 0.03 Archaeplastida
Pp3c21_1940V3.1 No alias expansin A9 0.03 Archaeplastida
Pp3c24_15400V3.1 No alias expansin A15 0.04 Archaeplastida
Pp3c3_16280V3.1 No alias expansin A14 0.06 Archaeplastida
Pp3c7_12870V3.1 No alias expansin A14 0.03 Archaeplastida
Pp3c8_14900V3.1 No alias expansin A14 0.04 Archaeplastida
Pp3c8_870V3.1 No alias expansin A1 0.04 Archaeplastida
Smo102623 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo143857 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.07 Archaeplastida
Smo174522 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
Smo230202 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo231226 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo409954 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
Smo75237 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.07 Archaeplastida
Smo90935 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.08 Archaeplastida
Solyc02g088100.3.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc03g031840.3.1 No alias No annotation 0.03 Archaeplastida
Solyc04g081870.4.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc05g052250.3.1 No alias alpha-class expansin 0.1 Archaeplastida
Solyc08g007780.3.1 No alias Putative expansin-A30 OS=Oryza sativa subsp. japonica... 0.16 Archaeplastida
Solyc08g080060.4.1 No alias alpha-class expansin 0.17 Archaeplastida
Solyc09g010860.4.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc10g084780.3.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc12g089380.2.1 No alias alpha-class expansin 0.07 Archaeplastida
Zm00001e000429_P001 No alias alpha-class expansin 0.05 Archaeplastida
Zm00001e003888_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e003889_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004714_P001 No alias alpha-class expansin 0.07 Archaeplastida
Zm00001e004719_P001 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e004720_P001 No alias alpha-class expansin 0.09 Archaeplastida
Zm00001e004721_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e010388_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e011741_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e014220_P001 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e014221_P001 No alias Expansin-A22 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e014231_P001 No alias Expansin-A13 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e014247_P001 No alias Expansin-A23 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e017221_P001 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e017334_P001 No alias alpha-class expansin 0.07 Archaeplastida
Zm00001e036693_P001 No alias alpha-class expansin 0.09 Archaeplastida
Zm00001e038997_P001 No alias alpha-class expansin 0.06 Archaeplastida
Zm00001e040578_P001 No alias alpha-class expansin 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0009826 unidimensional cell growth ISS Interproscan
BP GO:0009826 unidimensional cell growth NAS Interproscan
BP GO:0009828 plant-type cell wall loosening ISS Interproscan
BP GO:0009828 plant-type cell wall loosening NAS Interproscan
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth ISS Interproscan
BP GO:0010054 trichoblast differentiation RCA Interproscan
BP GO:0048446 petal morphogenesis RCA Interproscan
BP GO:0048765 root hair cell differentiation RCA Interproscan
BP GO:0048767 root hair elongation IMP Interproscan
BP GO:0048767 root hair elongation RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005381 iron ion transmembrane transporter activity IEP Neighborhood
MF GO:0005385 zinc ion transmembrane transporter activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
BP GO:0006829 zinc ion transport IEP Neighborhood
BP GO:0007043 cell-cell junction assembly IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
MF GO:0008446 GDP-mannose 4,6-dehydratase activity IEP Neighborhood
BP GO:0009267 cellular response to starvation IEP Neighborhood
CC GO:0009505 plant-type cell wall IEP Neighborhood
CC GO:0009531 secondary cell wall IEP Neighborhood
BP GO:0009698 phenylpropanoid metabolic process IEP Neighborhood
BP GO:0009699 phenylpropanoid biosynthetic process IEP Neighborhood
BP GO:0009806 lignan metabolic process IEP Neighborhood
BP GO:0009807 lignan biosynthetic process IEP Neighborhood
MF GO:0009927 histidine phosphotransfer kinase activity IEP Neighborhood
BP GO:0009991 response to extracellular stimulus IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010106 cellular response to iron ion starvation IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
BP GO:0010383 cell wall polysaccharide metabolic process IEP Neighborhood
BP GO:0010410 hemicellulose metabolic process IEP Neighborhood
BP GO:0010411 xyloglucan metabolic process IEP Neighborhood
BP GO:0010413 glucuronoxylan metabolic process IEP Neighborhood
BP GO:0010466 negative regulation of peptidase activity IEP Neighborhood
BP GO:0010951 negative regulation of endopeptidase activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0030162 regulation of proteolysis IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
MF GO:0030775 glucuronoxylan 4-O-methyltransferase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0031667 response to nutrient levels IEP Neighborhood
BP GO:0031668 cellular response to extracellular stimulus IEP Neighborhood
BP GO:0031669 cellular response to nutrient levels IEP Neighborhood
BP GO:0034329 cell junction assembly IEP Neighborhood
BP GO:0034330 cell junction organization IEP Neighborhood
BP GO:0035864 response to potassium ion IEP Neighborhood
BP GO:0035865 cellular response to potassium ion IEP Neighborhood
BP GO:0042594 response to starvation IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044038 cell wall macromolecule biosynthetic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044426 cell wall part IEP Neighborhood
CC GO:0044462 external encapsulating structure part IEP Neighborhood
BP GO:0045216 cell-cell junction organization IEP Neighborhood
BP GO:0045491 xylan metabolic process IEP Neighborhood
BP GO:0045492 xylan biosynthetic process IEP Neighborhood
BP GO:0045861 negative regulation of proteolysis IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
CC GO:0048226 Casparian strip IEP Neighborhood
BP GO:0048364 root development IEP Neighborhood
BP GO:0048527 lateral root development IEP Neighborhood
BP GO:0048528 post-embryonic root development IEP Neighborhood
BP GO:0048766 root hair initiation IEP Neighborhood
BP GO:0051346 negative regulation of hydrolase activity IEP Neighborhood
BP GO:0052547 regulation of peptidase activity IEP Neighborhood
BP GO:0052548 regulation of endopeptidase activity IEP Neighborhood
BP GO:0055062 phosphate ion homeostasis IEP Neighborhood
BP GO:0055083 monovalent inorganic anion homeostasis IEP Neighborhood
BP GO:0070589 cellular component macromolecule biosynthetic process IEP Neighborhood
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP Neighborhood
BP GO:0071365 cellular response to auxin stimulus IEP Neighborhood
BP GO:0071496 cellular response to external stimulus IEP Neighborhood
BP GO:0072506 trivalent inorganic anion homeostasis IEP Neighborhood
MF GO:0072509 divalent inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0072732 cellular response to calcium ion starvation IEP Neighborhood
BP GO:0090696 post-embryonic plant organ development IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 168 246
IPR009009 RlpA-like_DPBB 72 157
No external refs found!