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  5. Zm00001e004364_P002

Zm00001e004364_P002


Description : transcription factor (Trihelix)


Gene families : OG0000662 (Archaeplastida) Phylogenetic Tree(s): OG0000662_tree ,
OG_05_0000467 (LandPlants) Phylogenetic Tree(s): OG_05_0000467_tree ,
OG_06_0000568 (SeedPlants) Phylogenetic Tree(s): OG_06_0000568_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e004364_P002
Cluster HCCA: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
AT1G33240 AT-GTL1, GTL1, AT-GTL2 GT-2-like 1 0.06 Archaeplastida
AT1G76880 No alias Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
AT3G10000 EDA31 Homeodomain-like superfamily protein 0.03 Archaeplastida
GSVIVT01019722001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.03 Archaeplastida
GSVIVT01021832001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.03 Archaeplastida
GSVIVT01026588001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.02 Archaeplastida
GSVIVT01034705001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.05 Archaeplastida
LOC_Os02g01380.1 No alias transcription factor (Trihelix) 0.05 Archaeplastida
LOC_Os03g02240.1 No alias transcription factor (Trihelix) 0.13 Archaeplastida
LOC_Os04g45750.1 No alias transcription factor (Trihelix) 0.08 Archaeplastida
LOC_Os10g37240.4 No alias Trihelix transcription factor GT-2 OS=Arabidopsis... 0.03 Archaeplastida
MA_10427500g0020 No alias transcription factor (Trihelix) 0.04 Archaeplastida
MA_10427500g0030 No alias Trihelix transcription factor GTL1 OS=Arabidopsis... 0.03 Archaeplastida
MA_10433499g0020 No alias transcription factor (Trihelix) 0.02 Archaeplastida
MA_47951g0010 No alias transcription factor (Trihelix) 0.04 Archaeplastida
Mp8g08100.1 No alias transcription factor (Trihelix) 0.03 Archaeplastida
Pp3c21_18550V3.1 No alias Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
Zm00001e013403_P003 No alias transcription factor (Trihelix) 0.05 Archaeplastida
Zm00001e025402_P001 No alias transcription factor (Trihelix) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!