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  5. Zm00001e004384_P001

Zm00001e004384_P001


Description : Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana (sp|q689d6|rpd1_arath : 154.0)


Gene families : OG0002397 (Archaeplastida) Phylogenetic Tree(s): OG0002397_tree ,
OG_05_0001647 (LandPlants) Phylogenetic Tree(s): OG_05_0001647_tree ,
OG_06_0006838 (SeedPlants) Phylogenetic Tree(s): OG_06_0006838_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e004384_P001
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00049810 evm_27.TU.AmTr_v1... Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G06440 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.04 Archaeplastida
AT4G33495 RPD1 Ubiquitin carboxyl-terminal hydrolase family protein 0.04 Archaeplastida
LOC_Os01g43040.1 No alias Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e034752_P001 No alias Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR021099 PORR_domain 70 386
No external refs found!