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  5. Zm00001e004386_P001

Zm00001e004386_P001


Description : actin filament protein


Gene families : OG0000334 (Archaeplastida) Phylogenetic Tree(s): OG0000334_tree ,
OG_05_0000214 (LandPlants) Phylogenetic Tree(s): OG_05_0000214_tree ,
OG_06_0000153 (SeedPlants) Phylogenetic Tree(s): OG_06_0000153_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e004386_P001
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00088410 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin filament protein 0.03 Archaeplastida
AMTR_s00062p00184900 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin filament protein 0.04 Archaeplastida
AT3G12110 ACT11 actin-11 0.04 Archaeplastida
AT3G53750 ACT3 actin 3 0.04 Archaeplastida
GSVIVT01015049001 No alias Cytoskeleton.microfilament network.actin filament protein 0.03 Archaeplastida
Gb_08812 No alias actin filament protein 0.03 Archaeplastida
Gb_25131 No alias actin filament protein 0.03 Archaeplastida
LOC_Os03g50885.1 No alias actin filament protein 0.03 Archaeplastida
LOC_Os12g06660.1 No alias actin filament protein 0.03 Archaeplastida
MA_948394g0010 No alias actin filament protein 0.05 Archaeplastida
Smo233752 No alias Cytoskeleton.microfilament network.actin filament protein 0.03 Archaeplastida
Solyc03g078400.3.1 No alias actin filament protein 0.03 Archaeplastida
Solyc04g011500.3.1 No alias actin filament protein 0.04 Archaeplastida
Zm00001e006282_P001 No alias actin filament protein 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!