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  5. Zm00001e004460_P001

Zm00001e004460_P001


Description : RING-HC-class E3 ligase


Gene families : OG0001188 (Archaeplastida) Phylogenetic Tree(s): OG0001188_tree ,
OG_05_0001068 (LandPlants) Phylogenetic Tree(s): OG_05_0001068_tree ,
OG_06_0000881 (SeedPlants) Phylogenetic Tree(s): OG_06_0000881_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e004460_P001

Target Alias Description ECC score Gene Family Method Actions
AT1G13195 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G01520 No alias RING/U-box superfamily protein 0.03 Archaeplastida
GSVIVT01010299001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Pp3c4_24440V3.1 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Solyc10g009020.3.1 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
Zm00001e041948_P002 No alias RING-HC-class E3 ligase 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!