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  5. Zm00001e004553_P004

Zm00001e004553_P004


Description : transcription factor (HD-ZIP III)


Gene families : OG0000862 (Archaeplastida) Phylogenetic Tree(s): OG0000862_tree ,
OG_05_0000983 (LandPlants) Phylogenetic Tree(s): OG_05_0000983_tree ,
OG_06_0000998 (SeedPlants) Phylogenetic Tree(s): OG_06_0000998_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e004553_P004
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00085520 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AMTR_s00148p00033940 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.1 Archaeplastida
AMTR_s00155p00069240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.1 Archaeplastida
AT1G52150 ICU4, ATHB15,... Homeobox-leucine zipper family protein / lipid-binding... 0.04 Archaeplastida
AT2G34710 PHB-1D, ATHB-14,... Homeobox-leucine zipper family protein / lipid-binding... 0.02 Archaeplastida
AT4G32880 HB-8, ATHB8, ATHB-8 homeobox gene 8 0.05 Archaeplastida
AT5G60690 IFL1, IFL, REV Homeobox-leucine zipper family protein / lipid-binding... 0.06 Archaeplastida
GSVIVT01017010001 No alias RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
GSVIVT01021625001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01025193001 No alias RNA biosynthesis.transcriptional activation.HB... 0.1 Archaeplastida
GSVIVT01035612001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
Gb_02083 No alias transcription factor (HD-ZIP III) 0.05 Archaeplastida
Gb_18240 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Gb_18245 No alias transcription factor (HD-ZIP III) 0.05 Archaeplastida
Gb_22761 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
LOC_Os03g01890.1 No alias transcription factor (HD-ZIP III) 0.11 Archaeplastida
LOC_Os03g43930.1 No alias transcription factor (HD-ZIP III) 0.12 Archaeplastida
LOC_Os12g41860.1 No alias transcription factor (HD-ZIP III) 0.11 Archaeplastida
MA_10427484g0010 No alias transcription factor (HD-ZIP III) 0.02 Archaeplastida
MA_10435903g0020 No alias Homeobox-leucine zipper protein ATHB-15 OS=Arabidopsis... 0.02 Archaeplastida
MA_107764g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_19520g0020 No alias transcription factor (HD-ZIP III) 0.04 Archaeplastida
Mp1g24140.1 No alias transcription factor (HD-ZIP III) 0.04 Archaeplastida
Pp3c16_15450V3.1 No alias Homeobox-leucine zipper family protein / lipid-binding... 0.03 Archaeplastida
Pp3c3_30010V3.1 No alias homeobox gene 8 0.02 Archaeplastida
Pp3c4_5300V3.1 No alias homeobox gene 8 0.03 Archaeplastida
Smo270225 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Smo270954 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Smo77000 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Solyc02g024070.3.1 No alias transcription factor (HD-ZIP III) 0.05 Archaeplastida
Solyc03g120910.4.1 No alias transcription factor (HD-ZIP III) 0.05 Archaeplastida
Solyc08g066500.4.1 No alias transcription factor (HD-ZIP III) 0.07 Archaeplastida
Solyc11g069470.3.1 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Solyc12g044410.2.1 No alias transcription factor (HD-ZIP III) 0.08 Archaeplastida
Zm00001e025995_P002 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013978 MEKHLA 698 840
IPR001356 Homeobox_dom 28 85
IPR002913 START_lipid-bd_dom 164 372
No external refs found!