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  5. Zm00001e004657_P008

Zm00001e004657_P008


Description : E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana (sp|q9ffb6|zfp34_arath : 299.0)


Gene families : OG0001478 (Archaeplastida) Phylogenetic Tree(s): OG0001478_tree ,
OG_05_0001122 (LandPlants) Phylogenetic Tree(s): OG_05_0001122_tree ,
OG_06_0000963 (SeedPlants) Phylogenetic Tree(s): OG_06_0000963_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e004657_P008
Cluster HCCA: Cluster_342

Target Alias Description ECC score Gene Family Method Actions
AT5G22920 No alias CHY-type/CTCHY-type/RING-type Zinc finger protein 0.03 Archaeplastida
GSVIVT01031467001 No alias E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01033674001 No alias E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana 0.04 Archaeplastida
LOC_Os03g05270.1 No alias E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os03g22680.1 No alias E3 ubiquitin-protein ligase SRFP1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
MA_126866g0010 No alias Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza... 0.02 Archaeplastida
Pp3c14_5600V3.1 No alias CHY-type/CTCHY-type/RING-type Zinc finger protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 180 223
IPR008913 Znf_CHY 10 72
No external refs found!