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  5. Zm00001e004685_P002

Zm00001e004685_P002


Description : RING-HC-class E3 ligase


Gene families : OG0001188 (Archaeplastida) Phylogenetic Tree(s): OG0001188_tree ,
OG_05_0017933 (LandPlants) Phylogenetic Tree(s): OG_05_0017933_tree ,
OG_06_0017492 (SeedPlants) Phylogenetic Tree(s): OG_06_0017492_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e004685_P002
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01002021001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01024747001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.08 Archaeplastida
GSVIVT01033965001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
LOC_Os10g30850.1 No alias RING-HC-class E3 ligase 0.07 Archaeplastida
Pp3c4_24440V3.1 No alias RING/U-box superfamily protein 0.07 Archaeplastida
Solyc02g078460.3.1 No alias RING-HC-class E3 ligase 0.02 Archaeplastida
Zm00001e018924_P001 No alias RING-HC-class E3 ligase 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 137 176
No external refs found!