Zm00001e004804_P001

Description : pectin methylesterase

Gene families : OG0000078 (Archaeplastida) Phylogenetic Tree(s): OG0000078_tree ,
OG_05_0005471 (LandPlants) Phylogenetic Tree(s): OG_05_0005471_tree ,
OG_06_0005924 (SeedPlants) Phylogenetic Tree(s): OG_06_0005924_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e004804_P001

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01000525001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.03	Archaeplastida
GSVIVT01014641001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.01	Archaeplastida
GSVIVT01031250001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.02	Archaeplastida
Gb_01460	No alias	pectin methylesterase	0.01	Archaeplastida
Gb_23209	No alias	pectin methylesterase	0.03	Archaeplastida
Pp3c16_6660V3.1	No alias	Pectin lyase-like superfamily protein	0.01	Archaeplastida
Pp3c3_30560V3.1	No alias	Pectin lyase-like superfamily protein	0.02	Archaeplastida
Solyc07g065360.2.1	No alias	pectin methylesterase	0.01	Archaeplastida
Solyc09g091730.4.1	No alias	pectin methylesterase	0.11	Archaeplastida
Zm00001e027944_P002	No alias	pectin methylesterase	0.01	Archaeplastida
Zm00001e033546_P001	No alias	pectin methylesterase	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	Neighborhood
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006812	cation transport	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
MF	GO:0008238	exopeptidase activity	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
MF	GO:0070008	serine-type exopeptidase activity	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	22	304

External Links

No external refs found!