Zm00001e004809_P001


Description : transcription factor (DOF)


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0001523 (SeedPlants) Phylogenetic Tree(s): OG_06_0001523_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e004809_P001
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00010p00264070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00012p00176640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00030p00153440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AT1G21340 No alias Dof-type zinc finger DNA-binding family protein 0.02 Archaeplastida
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.02 Archaeplastida
AT3G45610 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT4G00940 No alias Dof-type zinc finger DNA-binding family protein 0.02 Archaeplastida
AT4G24060 No alias Dof-type zinc finger DNA-binding family protein 0.02 Archaeplastida
AT5G60850 OBP4 OBF binding protein 4 0.03 Archaeplastida
GSVIVT01007758001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01019619001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01024986001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01034189001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
Gb_09906 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os01g15900.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os01g17000.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os01g48290.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os02g15350.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os03g16850.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os04g58190.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os07g32510.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os08g38220.1 No alias transcription factor (DOF) 0.06 Archaeplastida
LOC_Os10g26620.1 No alias transcription factor (DOF) 0.05 Archaeplastida
MA_56828g0010 No alias transcription factor (DOF) 0.03 Archaeplastida
Mp2g20790.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Pp3c17_23300V3.1 No alias cycling DOF factor 3 0.03 Archaeplastida
Pp3c17_3860V3.1 No alias OBF binding protein 4 0.02 Archaeplastida
Pp3c4_850V3.1 No alias cycling DOF factor 3 0.02 Archaeplastida
Pp3c6_13360V3.1 No alias cycling DOF factor 3 0.02 Archaeplastida
Solyc02g077950.3.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc02g077960.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc02g090220.3.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc03g121400.1.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc06g071480.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e019172_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e023218_P004 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e035074_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e041944_P001 No alias transcription factor (DOF) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR003851 Znf_Dof 109 166
No external refs found!