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  5. AT3G11380

AT3G11380


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG0000235 (Archaeplastida) Phylogenetic Tree(s): OG0000235_tree ,
OG_05_0013964 (LandPlants) Phylogenetic Tree(s): OG_05_0013964_tree ,
OG_06_0013881 (SeedPlants) Phylogenetic Tree(s): OG_06_0013881_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G11380
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT1G05005 No alias No description available 0.03 Archaeplastida
AT1G07590 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Archaeplastida
AT1G43010 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002679 respiratory burst involved in defense response IEP Neighborhood
MF GO:0004033 aldo-keto reductase (NADP) activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004737 pyruvate decarboxylase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0005513 detection of calcium ion IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006863 purine nucleobase transport IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009593 detection of chemical stimulus IEP Neighborhood
BP GO:0009741 response to brassinosteroid IEP Neighborhood
BP GO:0009914 hormone transport IEP Neighborhood
BP GO:0009926 auxin polar transport IEP Neighborhood
CC GO:0009986 cell surface IEP Neighborhood
MF GO:0010294 abscisic acid glucosyltransferase activity IEP Neighborhood
BP GO:0010315 auxin efflux IEP Neighborhood
BP GO:0010411 xyloglucan metabolic process IEP Neighborhood
BP GO:0010540 basipetal auxin transport IEP Neighborhood
BP GO:0010541 acropetal auxin transport IEP Neighborhood
BP GO:0010583 response to cyclopentenone IEP Neighborhood
MF GO:0015105 arsenite transmembrane transporter activity IEP Neighborhood
BP GO:0015700 arsenite transport IEP Neighborhood
BP GO:0015851 nucleobase transport IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0043090 amino acid import IEP Neighborhood
BP GO:0043473 pigmentation IEP Neighborhood
BP GO:0043476 pigment accumulation IEP Neighborhood
BP GO:0043478 pigment accumulation in response to UV light IEP Neighborhood
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0043480 pigment accumulation in tissues IEP Neighborhood
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0045730 respiratory burst IEP Neighborhood
BP GO:0048527 lateral root development IEP Neighborhood
BP GO:0048528 post-embryonic root development IEP Neighborhood
BP GO:0051592 response to calcium ion IEP Neighborhood
BP GO:0060918 auxin transport IEP Neighborhood
BP GO:0090696 post-embryonic plant organ development IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 450 496
IPR002885 Pentatricopeptide_repeat 184 212
IPR002885 Pentatricopeptide_repeat 145 177
No external refs found!