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  5. Zm00001e005043_P002

Zm00001e005043_P002


Description : LSD/LOL programmed cell death regulator protein


Gene families : OG0002022 (Archaeplastida) Phylogenetic Tree(s): OG0002022_tree ,
OG_05_0001467 (LandPlants) Phylogenetic Tree(s): OG_05_0001467_tree ,
OG_06_0002097 (SeedPlants) Phylogenetic Tree(s): OG_06_0002097_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e005043_P002
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00140740 evm_27.TU.AmTr_v1... Multi-process regulation.programmed cell death.LSD/LOL... 0.07 Archaeplastida
LOC_Os03g43840.1 No alias LSD/LOL programmed cell death regulator protein 0.05 Archaeplastida
LOC_Os12g41700.1 No alias LSD/LOL programmed cell death regulator protein 0.02 Archaeplastida
MA_1006515g0010 No alias LSD/LOL programmed cell death regulator protein 0.02 Archaeplastida
Pp3c11_12260V3.1 No alias LSD1 zinc finger family protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR005735 Znf_LSD1 128 152
IPR005735 Znf_LSD1 51 75
IPR005735 Znf_LSD1 90 114
No external refs found!