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  5. Zm00001e005058_P001

Zm00001e005058_P001


Description : no hits & (original description: none)


Gene families : OG0002180 (Archaeplastida) Phylogenetic Tree(s): OG0002180_tree ,
OG_05_0001388 (LandPlants) Phylogenetic Tree(s): OG_05_0001388_tree ,
OG_06_0000687 (SeedPlants) Phylogenetic Tree(s): OG_06_0000687_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e005058_P001
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AT3G16490 IQD26 IQ-domain 26 0.05 Archaeplastida
AT4G14750 IQD19 IQ-domain 19 0.07 Archaeplastida
Gb_13836 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_37382 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g09470.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g43580.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_98760g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e016591_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 146 164
IPR000048 IQ_motif_EF-hand-BS 171 185
IPR025064 DUF4005 327 400
No external refs found!