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  5. Zm00001e005097_P001

Zm00001e005097_P001


Description : G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000101 (LandPlants) Phylogenetic Tree(s): OG_05_0000101_tree ,
OG_06_0000453 (SeedPlants) Phylogenetic Tree(s): OG_06_0000453_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e005097_P001
Cluster HCCA: Cluster_280

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00263730 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00021p00013790 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00025p00151950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00048p00125480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00048p00192390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00061p00096800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00106p00040830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00119p00095480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT2G40260 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT4G04605 No alias No description available 0.02 Archaeplastida
AT5G45580 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
GSVIVT01000606001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01013085001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01032776001 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
LOC_Os03g03760.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os04g56990.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os06g45410.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os08g06370.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os11g01480.1 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
LOC_Os12g01490.1 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
MA_138039g0010 No alias G2-like GARP transcription factor 0.04 Archaeplastida
MA_28188g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Pp3c14_26270V3.1 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
Pp3c20_11890V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c20_7050V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c26_3290V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c26_6050V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c3_14670V3.1 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
Pp3c3_34700V3.1 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
Smo417629 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Solyc02g076670.3.1 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
Solyc03g006150.2.1 No alias Putative Myb family transcription factor At1g14600... 0.04 Archaeplastida
Solyc10g078720.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc10g080460.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc10g085620.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e004125_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e034056_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e039024_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048582 positive regulation of post-embryonic development IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051094 positive regulation of developmental process IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051240 positive regulation of multicellular organismal process IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000038 regulation of stomatal complex development IEP Neighborhood
BP GO:2000123 positive regulation of stomatal complex development IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 112 163
No external refs found!