Zm00001e005111_P001

Description : cyclin (CYCD)

Gene families : OG0000252 (Archaeplastida) Phylogenetic Tree(s): OG0000252_tree ,
OG_05_0007410 (LandPlants) Phylogenetic Tree(s): OG_05_0007410_tree ,
OG_06_0004640 (SeedPlants) Phylogenetic Tree(s): OG_06_0004640_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e005111_P001
Cluster	HCCA: Cluster_284

Target	Alias	Description	ECC score	Gene Family Method
AT5G02110	CYCD7;1, CYCD7	CYCLIN D7;1	0.01	Archaeplastida
LOC_Os09g02360.1	No alias	cyclin (CYCD)	0.01	Archaeplastida
Zm00001e000749_P002	No alias	no hits & (original description: none)	0.12	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
CC	GO:0044217	other organism part	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	Neighborhood
MF	GO:0004527	exonuclease activity	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Neighborhood
MF	GO:0008408	3'-5' exonuclease activity	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0046483	heterocycle metabolic process	IEP	Neighborhood
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004367	Cyclin_C-dom	232	310
IPR006671	Cyclin_N	97	201

External Links

No external refs found!