Description : component GRF of GRF-GIF transcriptional complex
Gene families : OG0000341 (Archaeplastida) Phylogenetic Tree(s): OG0000341_tree ,
OG_05_0017597 (LandPlants) Phylogenetic Tree(s): OG_05_0017597_tree ,
OG_06_0017099 (SeedPlants) Phylogenetic Tree(s): OG_06_0017099_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e005165_P002 | |
Cluster | HCCA: Cluster_277 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00040p00189460 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.02 | Archaeplastida | |
AMTR_s00065p00092420 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.06 | Archaeplastida | |
AT2G22840 | GRF1, AtGRF1 | growth-regulating factor 1 | 0.03 | Archaeplastida | |
AT2G36400 | GRF3, AtGRF3 | growth-regulating factor 3 | 0.03 | Archaeplastida | |
GSVIVT01007165001 | No alias | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.03 | Archaeplastida | |
GSVIVT01009299001 | No alias | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.04 | Archaeplastida | |
GSVIVT01015095001 | No alias | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.04 | Archaeplastida | |
GSVIVT01019913001 | No alias | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.04 | Archaeplastida | |
GSVIVT01024326001 | No alias | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.05 | Archaeplastida | |
GSVIVT01027535001 | No alias | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.03 | Archaeplastida | |
Gb_20400 | No alias | component GRF of GRF-GIF transcriptional complex | 0.02 | Archaeplastida | |
LOC_Os02g45570.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.03 | Archaeplastida | |
LOC_Os03g47140.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.03 | Archaeplastida | |
LOC_Os03g51970.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.03 | Archaeplastida | |
LOC_Os12g29980.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.03 | Archaeplastida | |
MA_33661g0010 | No alias | component GRF of GRF-GIF transcriptional complex | 0.02 | Archaeplastida | |
Mp8g16900.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.05 | Archaeplastida | |
Pp3c12_3720V3.1 | No alias | growth-regulating factor 2 | 0.04 | Archaeplastida | |
Pp3c17_1780V3.1 | No alias | growth-regulating factor 2 | 0.03 | Archaeplastida | |
Solyc01g091540.3.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.04 | Archaeplastida | |
Solyc03g082430.1.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.03 | Archaeplastida | |
Solyc04g077510.4.1 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida | |
Solyc08g005430.3.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.02 | Archaeplastida | |
Solyc10g083510.2.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.05 | Archaeplastida | |
Solyc12g096070.2.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
MF | GO:0005215 | transporter activity | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
BP | GO:0006260 | DNA replication | IEP | Neighborhood |
BP | GO:0006401 | RNA catabolic process | IEP | Neighborhood |
MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Neighborhood |
BP | GO:0009719 | response to endogenous stimulus | IEP | Neighborhood |
BP | GO:0009725 | response to hormone | IEP | Neighborhood |
BP | GO:0010033 | response to organic substance | IEP | Neighborhood |
CC | GO:0016020 | membrane | IEP | Neighborhood |
MF | GO:0016409 | palmitoyltransferase activity | IEP | Neighborhood |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Neighborhood |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
CC | GO:0032299 | ribonuclease H2 complex | IEP | Neighborhood |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Neighborhood |
BP | GO:0042221 | response to chemical | IEP | Neighborhood |
MF | GO:0042393 | histone binding | IEP | Neighborhood |
BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
BP | GO:0055085 | transmembrane transport | IEP | Neighborhood |
BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
No external refs found! |