AT3G11550

Description : Uncharacterised protein family (UPF0497)

Gene families : OG0000389 (Archaeplastida) Phylogenetic Tree(s): OG0000389_tree ,
OG_05_0000192 (LandPlants) Phylogenetic Tree(s): OG_05_0000192_tree ,
OG_06_0001302 (SeedPlants) Phylogenetic Tree(s): OG_06_0001302_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G11550
Cluster	HCCA: Cluster_47

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00265970	evm_27.TU.AmTr_v1...	Casparian strip membrane protein 3 OS=Sorghum bicolor	0.05	Archaeplastida
AMTR_s00016p00176090	evm_27.TU.AmTr_v1...	CASP-like protein 1F1 OS=Ricinus communis	0.04	Archaeplastida
AMTR_s00016p00177940	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida
AMTR_s00016p00178190	evm_27.TU.AmTr_v1...	CASP-like protein 1F1 OS=Vitis vinifera	0.04	Archaeplastida
AMTR_s00040p00135930	evm_27.TU.AmTr_v1...	Casparian strip membrane protein 2 OS=Vitis vinifera	0.1	Archaeplastida
AMTR_s00057p00159510	evm_27.TU.AmTr_v1...	CASP-like protein 1D1 OS=Ricinus communis	0.07	Archaeplastida
AMTR_s00092p00142720	evm_27.TU.AmTr_v1...	CASP-like protein 1B2 OS=Populus trichocarpa	0.03	Archaeplastida
AT3G06390	No alias	Uncharacterised protein family (UPF0497)	0.04	Archaeplastida
AT4G20390	No alias	Uncharacterised protein family (UPF0497)	0.04	Archaeplastida
AT5G44550	No alias	Uncharacterised protein family (UPF0497)	0.03	Archaeplastida
GSVIVT01008618001	No alias	CASP-like protein 1F1 OS=Vitis vinifera	0.04	Archaeplastida
GSVIVT01011443001	No alias	Casparian strip membrane protein 3 OS=Vitis vinifera	0.02	Archaeplastida
GSVIVT01020544001	No alias	CASP-like protein 1C2 OS=Vitis vinifera	0.07	Archaeplastida
GSVIVT01037957001	No alias	CASP-like protein 1B2 OS=Vitis vinifera	0.07	Archaeplastida
Gb_11696	No alias	CASP-like protein 1U1 OS=Picea sitchensis...	0.03	Archaeplastida
Gb_26811	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os01g13560.1	No alias	CASP-like protein 1C1 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
LOC_Os02g36845.1	No alias	Casparian strip membrane protein 7 OS=Oryza sativa...	0.05	Archaeplastida
LOC_Os04g38690.1	No alias	Casparian strip membrane protein 1 OS=Oryza rufipogon...	0.12	Archaeplastida
LOC_Os04g58760.1	No alias	Casparian strip membrane protein 1 OS=Oryza sativa...	0.11	Archaeplastida
LOC_Os05g15630.1	No alias	CASP-like protein BLE3 OS=Oryza sativa subsp. indica...	0.07	Archaeplastida
LOC_Os06g12500.1	No alias	Casparian strip membrane protein 3 OS=Oryza sativa...	0.12	Archaeplastida
LOC_Os08g01160.1	No alias	Casparian strip membrane protein 2 OS=Oryza sativa...	0.09	Archaeplastida
LOC_Os12g41690.1	No alias	CASP-like protein 1B1 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_1041g0010	No alias	Casparian strip membrane protein 2 OS=Triphysaria...	0.05	Archaeplastida
MA_10431939g0010	No alias	CASP-like protein 1U1 OS=Picea sitchensis...	0.05	Archaeplastida
MA_3155878g0010	No alias	no hits & (original description: none)	0.06	Archaeplastida
MA_5227376g0010	No alias	Casparian strip membrane protein 1 OS=Picea glauca...	0.05	Archaeplastida
MA_5618864g0010	No alias	CASP-like protein 1U1 OS=Picea sitchensis...	0.06	Archaeplastida
MA_64798g0010	No alias	Casparian strip membrane protein 1 OS=Picea glauca...	0.04	Archaeplastida
MA_67384g0020	No alias	CASP-like protein 1U1 OS=Picea sitchensis...	0.05	Archaeplastida
MA_90653g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_93690g0010	No alias	Casparian strip membrane protein 1 OS=Pinus taeda...	0.08	Archaeplastida
MA_94788g0010	No alias	CASP-like protein 1U1 OS=Picea sitchensis...	0.04	Archaeplastida
Pp3c10_17030V3.1	No alias	Uncharacterised protein family (UPF0497)	0.02	Archaeplastida
Pp3c12_23940V3.1	No alias	Uncharacterised protein family (UPF0497)	0.04	Archaeplastida
Pp3c14_2270V3.1	No alias	Uncharacterised protein family (UPF0497)	0.03	Archaeplastida
Pp3c4_1550V3.1	No alias	Uncharacterised protein family (UPF0497)	0.03	Archaeplastida
Solyc02g067190.4.1	No alias	Casparian strip membrane protein 1 OS=Solanum tuberosum...	0.05	Archaeplastida
Solyc02g069730.3.1	No alias	CASP-like protein 1B1 OS=Ricinus communis...	0.06	Archaeplastida
Solyc04g005620.3.1	No alias	Casparian strip membrane protein 2 OS=Solanum demissum...	0.11	Archaeplastida
Solyc06g074230.3.1	No alias	Casparian strip membrane protein 2 OS=Triphysaria...	0.11	Archaeplastida
Solyc09g010200.4.1	No alias	Casparian strip membrane protein 1 OS=Nicotiana tabacum...	0.13	Archaeplastida
Solyc10g083250.2.1	No alias	Casparian strip membrane protein 1 OS=Nicotiana tabacum...	0.12	Archaeplastida
Zm00001e003216_P001	No alias	CASP-like protein 1B1 OS=Zea mays (sp\|b6tuh4\|cspl2_maize : 130.0)	0.06	Archaeplastida
Zm00001e006491_P001	No alias	Casparian strip membrane protein 2 OS=Zea mays...	0.06	Archaeplastida
Zm00001e015806_P001	No alias	Casparian strip membrane protein 3 OS=Sorghum bicolor...	0.05	Archaeplastida
Zm00001e024279_P001	No alias	Casparian strip membrane protein 2 OS=Sorghum bicolor...	0.05	Archaeplastida
Zm00001e026902_P001	No alias	CASP-like protein 1C2 OS=Zea mays (sp\|b6szu6\|cspl5_maize : 227.0)	0.06	Archaeplastida
Zm00001e036094_P001	No alias	Casparian strip membrane protein 1 OS=Zea mays...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0007043	cell-cell junction assembly	IDA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010410	hemicellulose metabolic process	None	Extended
BP	GO:0010413	glucuronoxylan metabolic process	RCA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034329	cell junction assembly	None	Extended
BP	GO:0034330	cell junction organization	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0042545	cell wall modification	IMP	Interproscan
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	ISS	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044038	cell wall macromolecule biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
CC	GO:0044426	cell wall part	None	Extended
CC	GO:0044462	external encapsulating structure part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045216	cell-cell junction organization	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0045491	xylan metabolic process	None	Extended
BP	GO:0045492	xylan biosynthetic process	RCA	Interproscan
MF	GO:0046983	protein dimerization activity	None	Extended
CC	GO:0048226	Casparian strip	IDA	Interproscan
BP	GO:0070589	cellular component macromolecule biosynthetic process	None	Extended
BP	GO:0070592	cell wall polysaccharide biosynthetic process	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Neighborhood
CC	GO:0000325	plant-type vacuole	IEP	Neighborhood
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
MF	GO:0004565	beta-galactosidase activity	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0005275	amine transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005372	water transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005385	zinc ion transmembrane transporter activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
BP	GO:0006694	steroid biosynthetic process	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006812	cation transport	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
BP	GO:0006826	iron ion transport	IEP	Neighborhood
BP	GO:0006829	zinc ion transport	IEP	Neighborhood
BP	GO:0007154	cell communication	IEP	Neighborhood
BP	GO:0008202	steroid metabolic process	IEP	Neighborhood
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Neighborhood
BP	GO:0009267	cellular response to starvation	IEP	Neighborhood
BP	GO:0009698	phenylpropanoid metabolic process	IEP	Neighborhood
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	Neighborhood
CC	GO:0009705	plant-type vacuole membrane	IEP	Neighborhood
BP	GO:0009804	coumarin metabolic process	IEP	Neighborhood
BP	GO:0009805	coumarin biosynthetic process	IEP	Neighborhood
BP	GO:0009806	lignan metabolic process	IEP	Neighborhood
BP	GO:0009807	lignan biosynthetic process	IEP	Neighborhood
BP	GO:0009828	plant-type cell wall loosening	IEP	Neighborhood
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	IEP	Neighborhood
BP	GO:0009991	response to extracellular stimulus	IEP	Neighborhood
BP	GO:0010035	response to inorganic substance	IEP	Neighborhood
BP	GO:0010053	root epidermal cell differentiation	IEP	Neighborhood
BP	GO:0010054	trichoblast differentiation	IEP	Neighborhood
BP	GO:0010106	cellular response to iron ion starvation	IEP	Neighborhood
BP	GO:0010167	response to nitrate	IEP	Neighborhood
MF	GO:0010283	pinoresinol reductase activity	IEP	Neighborhood
BP	GO:0010345	suberin biosynthetic process	IEP	Neighborhood
BP	GO:0010411	xyloglucan metabolic process	IEP	Neighborhood
MF	GO:0015101	organic cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015200	methylammonium transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015250	water channel activity	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
BP	GO:0015698	inorganic anion transport	IEP	Neighborhood
BP	GO:0015706	nitrate transport	IEP	Neighborhood
BP	GO:0016049	cell growth	IEP	Neighborhood
BP	GO:0016128	phytosteroid metabolic process	IEP	Neighborhood
BP	GO:0016129	phytosteroid biosynthetic process	IEP	Neighborhood
BP	GO:0016131	brassinosteroid metabolic process	IEP	Neighborhood
BP	GO:0016132	brassinosteroid biosynthetic process	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Neighborhood
BP	GO:0019748	secondary metabolic process	IEP	Neighborhood
BP	GO:0021700	developmental maturation	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022838	substrate-specific channel activity	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
BP	GO:0030154	cell differentiation	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
BP	GO:0031667	response to nutrient levels	IEP	Neighborhood
BP	GO:0031668	cellular response to extracellular stimulus	IEP	Neighborhood
BP	GO:0031669	cellular response to nutrient levels	IEP	Neighborhood
BP	GO:0032502	developmental process	IEP	Neighborhood
BP	GO:0035864	response to potassium ion	IEP	Neighborhood
BP	GO:0035865	cellular response to potassium ion	IEP	Neighborhood
BP	GO:0040007	growth	IEP	Neighborhood
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	Neighborhood
BP	GO:0042594	response to starvation	IEP	Neighborhood
CC	GO:0042807	central vacuole	IEP	Neighborhood
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	Neighborhood
BP	GO:0048446	petal morphogenesis	IEP	Neighborhood
BP	GO:0048469	cell maturation	IEP	Neighborhood
BP	GO:0048528	post-embryonic root development	IEP	Neighborhood
BP	GO:0048588	developmental cell growth	IEP	Neighborhood
BP	GO:0048589	developmental growth	IEP	Neighborhood
BP	GO:0048764	trichoblast maturation	IEP	Neighborhood
BP	GO:0048765	root hair cell differentiation	IEP	Neighborhood
BP	GO:0048766	root hair initiation	IEP	Neighborhood
BP	GO:0048767	root hair elongation	IEP	Neighborhood
BP	GO:0048869	cellular developmental process	IEP	Neighborhood
BP	GO:0055062	phosphate ion homeostasis	IEP	Neighborhood
BP	GO:0055083	monovalent inorganic anion homeostasis	IEP	Neighborhood
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	Neighborhood
BP	GO:0071365	cellular response to auxin stimulus	IEP	Neighborhood
BP	GO:0071496	cellular response to external stimulus	IEP	Neighborhood
BP	GO:0071695	anatomical structure maturation	IEP	Neighborhood
BP	GO:0071705	nitrogen compound transport	IEP	Neighborhood
BP	GO:0072505	divalent inorganic anion homeostasis	IEP	Neighborhood
BP	GO:0072506	trivalent inorganic anion homeostasis	IEP	Neighborhood
MF	GO:0072509	divalent inorganic cation transmembrane transporter activity	IEP	Neighborhood
BP	GO:0072732	cellular response to calcium ion starvation	IEP	Neighborhood
BP	GO:0080147	root hair cell development	IEP	Neighborhood
BP	GO:0090627	plant epidermal cell differentiation	IEP	Neighborhood
BP	GO:0090696	post-embryonic plant organ development	IEP	Neighborhood
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Neighborhood
BP	GO:1901698	response to nitrogen compound	IEP	Neighborhood
BP	GO:1901700	response to oxygen-containing compound	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006702	CASP_dom	41	189

External Links

No external refs found!

AT3G11550

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation