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  5. AT3G11600

AT3G11600


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0001166 (Archaeplastida) Phylogenetic Tree(s): OG0001166_tree ,
OG_05_0000713 (LandPlants) Phylogenetic Tree(s): OG_05_0000713_tree ,
OG_06_0000854 (SeedPlants) Phylogenetic Tree(s): OG_06_0000854_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G11600
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
AT3G52561 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 Archaeplastida
LOC_Os04g58790.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g37030.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g06130.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Pp3c1_28820V3.1 No alias No annotation 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0080167 response to karrikin IEP Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004560 alpha-L-fucosidase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006516 glycoprotein catabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0008360 regulation of cell shape IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0008810 cellulase activity IEP Neighborhood
BP GO:0009100 glycoprotein metabolic process IEP Neighborhood
BP GO:0009791 post-embryonic development IEP Neighborhood
BP GO:0009886 post-embryonic animal morphogenesis IEP Neighborhood
BP GO:0009888 tissue development IEP Neighborhood
BP GO:0009900 dehiscence IEP Neighborhood
BP GO:0009913 epidermal cell differentiation IEP Neighborhood
BP GO:0010047 fruit dehiscence IEP Neighborhood
BP GO:0010052 guard cell differentiation IEP Neighborhood
BP GO:0010093 specification of floral organ identity IEP Neighborhood
BP GO:0010160 formation of animal organ boundary IEP Neighborhood
BP GO:0010268 brassinosteroid homeostasis IEP Neighborhood
BP GO:0010374 stomatal complex development IEP Neighborhood
BP GO:0010383 cell wall polysaccharide metabolic process IEP Neighborhood
BP GO:0010410 hemicellulose metabolic process IEP Neighborhood
BP GO:0010413 glucuronoxylan metabolic process IEP Neighborhood
BP GO:0010417 glucuronoxylan biosynthetic process IEP Neighborhood
MF GO:0015928 fucosidase activity IEP Neighborhood
MF GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0018685 alkane 1-monooxygenase activity IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0030855 epithelial cell differentiation IEP Neighborhood
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043455 regulation of secondary metabolic process IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044038 cell wall macromolecule biosynthetic process IEP Neighborhood
BP GO:0045491 xylan metabolic process IEP Neighborhood
BP GO:0045492 xylan biosynthetic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0048437 floral organ development IEP Neighborhood
BP GO:0048440 carpel development IEP Neighborhood
BP GO:0048441 petal development IEP Neighborhood
BP GO:0048445 carpel morphogenesis IEP Neighborhood
BP GO:0048481 plant ovule development IEP Neighborhood
BP GO:0048608 reproductive structure development IEP Neighborhood
BP GO:0048827 phyllome development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0048859 formation of anatomical boundary IEP Neighborhood
BP GO:0055088 lipid homeostasis IEP Neighborhood
BP GO:0070589 cellular component macromolecule biosynthetic process IEP Neighborhood
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP Neighborhood
BP GO:0080154 regulation of fertilization IEP Neighborhood
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP Neighborhood
BP GO:0090558 plant epidermis development IEP Neighborhood
BP GO:0090701 specification of plant organ identity IEP Neighborhood
BP GO:0099402 plant organ development IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1900376 regulation of secondary metabolite biosynthetic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:2000029 regulation of proanthocyanidin biosynthetic process IEP Neighborhood
BP GO:2000762 regulation of phenylpropanoid metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!