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  5. Zm00001e005507_P001

Zm00001e005507_P001


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000116 (LandPlants) Phylogenetic Tree(s): OG_05_0000116_tree ,
OG_06_0000572 (SeedPlants) Phylogenetic Tree(s): OG_06_0000572_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e005507_P001
Cluster HCCA: Cluster_296

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00006p00267240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00012p00208260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00022p00252530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
AMTR_s00024p00137930 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00036p00107460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00038p00183620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00045p00146180 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00079p00143780 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s01267p00006490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G16490 MYB58, ATMYB58 myb domain protein 58 0.05 Archaeplastida
AT1G17950 BW52, ATMYB52, MYB52 myb domain protein 52 0.04 Archaeplastida
AT1G25340 MYB116, AtMYB116 myb domain protein 116 0.05 Archaeplastida
AT1G35515 MYB8, HOS10 high response to osmotic stress 10 0.02 Archaeplastida
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.04 Archaeplastida
AT1G68320 BW62B, BW62C,... myb domain protein 62 0.06 Archaeplastida
AT1G79180 ATMYB63, MYB63 myb domain protein 63 0.04 Archaeplastida
AT2G32460 ATMYB101, MYB101, ATM1 myb domain protein 101 0.03 Archaeplastida
AT2G47460 ATMYB12, PFG1, MYB12 myb domain protein 12 0.02 Archaeplastida
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.03 Archaeplastida
AT3G02940 AtMYB107, MYB107 myb domain protein 107 0.03 Archaeplastida
AT3G13540 ATMYB5, MYB5 myb domain protein 5 0.03 Archaeplastida
AT3G23250 ATMYB15, ATY19, MYB15 myb domain protein 15 0.03 Archaeplastida
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.02 Archaeplastida
AT3G28910 MYB30, ATMYB30 myb domain protein 30 0.02 Archaeplastida
AT3G48920 MYB45, AtMYB45 myb domain protein 45 0.04 Archaeplastida
AT3G55730 AtMYB109, MYB109 myb domain protein 109 0.02 Archaeplastida
AT3G62610 ATMYB11, PFG2, MYB11 myb domain protein 11 0.02 Archaeplastida
AT4G12350 AtMYB42, MYB42 myb domain protein 42 0.04 Archaeplastida
AT4G17785 MYB39 myb domain protein 39 0.02 Archaeplastida
AT4G22680 AtMYB85, MYB85 myb domain protein 85 0.04 Archaeplastida
AT4G33450 ATMYB69, MYB69 myb domain protein 69 0.04 Archaeplastida
AT4G38620 ATMYB4, MYB4 myb domain protein 4 0.02 Archaeplastida
AT5G12870 ATMYB46, MYB46 myb domain protein 46 0.03 Archaeplastida
AT5G15310 ATMIXTA, MYB16, ATMYB16 myb domain protein 16 0.04 Archaeplastida
AT5G16600 MYB43, AtMYB43 myb domain protein 43 0.03 Archaeplastida
AT5G26660 MYB86, ATMYB86 myb domain protein 86 0.03 Archaeplastida
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.02 Archaeplastida
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.02 Archaeplastida
AT5G52260 MYB19, AtMYB19 myb domain protein 19 0.05 Archaeplastida
AT5G54230 MYB49, AtMYB49 myb domain protein 49 0.04 Archaeplastida
AT5G59780 ATMYB59-1,... myb domain protein 59 0.03 Archaeplastida
AT5G62470 MYBCOV1, MYB96, ATMYB96 myb domain protein 96 0.03 Archaeplastida
Cre07.g345350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01000450001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01003662001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01004317001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01004851001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01007981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01008484001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01009032001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01010006001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01010086001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01011447001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01012778001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01013126001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01017716001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01018577001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01019410001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01025034001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01025269001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01027182001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01027949001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01028235001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01031341001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01032088001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
Gb_01889 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_02422 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_09998 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_11536 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_15814 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_26833 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_39852 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g03720.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g07450.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g18240.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g50110.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g02370.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g46780.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os03g19120.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g51110.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os04g43680.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g04820.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g46610.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g43420.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os07g44090.3 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os08g05520.1 No alias transcription factor (MYB) 0.1 Archaeplastida
LOC_Os12g03150.1 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10048467g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10426901g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10426901g0020 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10429682g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10859g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_1201g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_121533g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_12445g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_124887g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_130918g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_136123g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_139238g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_14061g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_14730g0020 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_15687g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_17672g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_179894g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_21440g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_31666g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_33964g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_37256g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_446064g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_45091g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_460508g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_4783697g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_53644g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_62361g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_81763g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_8206949g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_8464929g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_93127g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_9374017g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_948059g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_97537g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
Mp1g17210.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp3g07510.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Pp3c15_24080V3.1 No alias myb domain protein 33 0.03 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.05 Archaeplastida
Pp3c18_340V3.1 No alias myb domain protein 105 0.02 Archaeplastida
Pp3c19_20750V3.1 No alias myb domain protein 20 0.03 Archaeplastida
Pp3c1_21610V3.1 No alias myb domain protein 103 0.02 Archaeplastida
Pp3c6_24650V3.1 No alias myb domain protein 109 0.02 Archaeplastida
Pp3c7_23450V3.1 No alias myb domain protein 106 0.03 Archaeplastida
Pp3c7_23490V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Smo6091 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Smo84608 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Smo98669 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
Solyc01g009070.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc01g087130.4.1 No alias transcription factor (MYB) 0.07 Archaeplastida
Solyc02g067760.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc02g082040.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc02g086690.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g088190.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc02g092930.1.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g113530.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g116100.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc04g005710.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc04g056310.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc04g074170.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc06g069850.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g076840.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc08g076710.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc08g079270.3.1 No alias transcription factor (MYB) 0.09 Archaeplastida
Solyc08g081500.3.1 No alias transcription factor (MYB) 0.09 Archaeplastida
Solyc09g008250.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc10g005760.3.1 No alias transcription factor (MYB). transcriptional key... 0.03 Archaeplastida
Solyc10g008700.3.1 No alias No annotation 0.03 Archaeplastida
Solyc10g055410.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc11g011050.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc11g065840.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc12g099130.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004164_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e007085_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e009849_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e012960_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e015884_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e017428_P003 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e019110_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020044_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e028135_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e029600_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e029816_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e034214_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e035993_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e040384_P001 No alias transcription factor (MYB) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 56 99
IPR001005 SANT/Myb 4 49
No external refs found!