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  5. Zm00001e005534_P002

Zm00001e005534_P002


Description : component WDR5 of COMPASS histone trimethylation complex


Gene families : OG0001835 (Archaeplastida) Phylogenetic Tree(s): OG0001835_tree ,
OG_05_0001929 (LandPlants) Phylogenetic Tree(s): OG_05_0001929_tree ,
OG_06_0001958 (SeedPlants) Phylogenetic Tree(s): OG_06_0001958_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e005534_P002
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AT3G49660 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Archaeplastida
Cpa|evm.model.tig00000378.20 No alias Chromatin organisation.histone modifications.histone... 0.01 Archaeplastida
Cpa|evm.model.tig00020902.59 No alias Transcription initiation factor TFIID subunit 5... 0.01 Archaeplastida
LOC_Os03g51550.2 No alias component WDR5 of COMPASS histone trimethylation complex 0.02 Archaeplastida
MA_62019g0010 No alias component WDR5 of COMPASS histone trimethylation complex 0.04 Archaeplastida
Solyc02g091790.3.1 No alias component WDR5 of COMPASS histone trimethylation complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Neighborhood
BP GO:0000077 DNA damage checkpoint IEP Neighborhood
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006333 chromatin assembly or disassembly IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
CC GO:0030896 checkpoint clamp complex IEP Neighborhood
BP GO:0031570 DNA integrity checkpoint IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 19 53
IPR001680 WD40_repeat 144 182
IPR001680 WD40_repeat 59 95
IPR001680 WD40_repeat 187 225
IPR001680 WD40_repeat 229 270
IPR001680 WD40_repeat 104 139
IPR001680 WD40_repeat 276 313
No external refs found!