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  5. Zm00001e005554_P001

Zm00001e005554_P001


Description : transcription factor (bHLH). transcriptional regulator (CIB)


Gene families : OG0000051 (Archaeplastida) Phylogenetic Tree(s): OG0000051_tree ,
OG_05_0000091 (LandPlants) Phylogenetic Tree(s): OG_05_0000091_tree ,
OG_06_0000169 (SeedPlants) Phylogenetic Tree(s): OG_06_0000169_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e005554_P001
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00138470 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.02 Archaeplastida
AT1G26260 CIB5 cryptochrome-interacting basic-helix-loop-helix 5 0.03 Archaeplastida
AT3G23690 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT4G02590 UNE12 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
GSVIVT01025313001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
LOC_Os03g51910.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.07 Archaeplastida
LOC_Os09g25040.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Mp6g18480.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
Pp3c12_25990V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c2_620V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.07 Archaeplastida
Pp3c4_3920V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c5_18850V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Zm00001e003701_P003 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.08 Archaeplastida
Zm00001e010138_P002 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.06 Archaeplastida
Zm00001e011410_P001 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.08 Archaeplastida
Zm00001e018857_P002 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 147 195
No external refs found!