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  5. Zm00001e005646_P001

Zm00001e005646_P001


Description : p24-beta COPI trafficking regulator protein


Gene families : OG0001384 (Archaeplastida) Phylogenetic Tree(s): OG0001384_tree ,
OG_05_0004725 (LandPlants) Phylogenetic Tree(s): OG_05_0004725_tree ,
OG_06_0006144 (SeedPlants) Phylogenetic Tree(s): OG_06_0006144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e005646_P001
Cluster HCCA: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00270370 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 Archaeplastida
AT3G07680 No alias emp24/gp25L/p24 family/GOLD family protein 0.08 Archaeplastida
Cpa|evm.model.tig00000248.9 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
Cre17.g731150 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
GSVIVT01018049001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 Archaeplastida
Gb_35698 No alias p24-beta COPI trafficking regulator protein 0.02 Archaeplastida
MA_15776g0020 No alias p24-beta COPI trafficking regulator protein 0.03 Archaeplastida
Mp4g21570.1 No alias p24-beta COPI trafficking regulator protein 0.02 Archaeplastida
Pp3c21_13400V3.1 No alias emp24/gp25L/p24 family/GOLD family protein 0.04 Archaeplastida
Smo116990 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
Solyc03g005270.3.1 No alias p24-beta COPI trafficking regulator protein 0.04 Archaeplastida
Solyc07g065650.2.1 No alias p24-beta COPI trafficking regulator protein 0.05 Archaeplastida
Solyc09g082770.3.1 No alias p24-beta COPI trafficking regulator protein 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Neighborhood
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0030008 TRAPP complex IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043085 positive regulation of catalytic activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044093 positive regulation of molecular function IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR009038 GOLD_dom 32 204
No external refs found!