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  5. Zm00001e005667_P001

Zm00001e005667_P001


Description : PHD finger transcription factor


Gene families : OG0000311 (Archaeplastida) Phylogenetic Tree(s): OG0000311_tree ,
OG_05_0000567 (LandPlants) Phylogenetic Tree(s): OG_05_0000567_tree ,
OG_06_0001295 (SeedPlants) Phylogenetic Tree(s): OG_06_0001295_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e005667_P001
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00203500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.04 Archaeplastida
AMTR_s00140p00029580 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.06 Archaeplastida
AMTR_s00146p00080830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.03 Archaeplastida
AT1G05380 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 Archaeplastida
AT2G27980 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.09 Archaeplastida
AT2G36720 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.05 Archaeplastida
AT4G14920 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.05 Archaeplastida
AT5G36740 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 Archaeplastida
Cre01.g018200 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.06 Archaeplastida
Cre16.g694208 No alias No description available 0.07 Archaeplastida
GSVIVT01014219001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.09 Archaeplastida
GSVIVT01016041001 No alias Heat shock cognate protein 80 OS=Solanum lycopersicum 0.02 Archaeplastida
GSVIVT01017972001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.12 Archaeplastida
GSVIVT01033711001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.06 Archaeplastida
Gb_06644 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.11 Archaeplastida
Gb_10246 No alias PHD finger transcription factor 0.03 Archaeplastida
Gb_41247 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.02 Archaeplastida
LOC_Os03g53630.1 No alias PHD finger transcription factor 0.04 Archaeplastida
LOC_Os04g59510.1 No alias PHD finger transcription factor 0.04 Archaeplastida
LOC_Os07g07690.1 No alias PHD finger transcription factor 0.03 Archaeplastida
MA_139275g0010 No alias PHD finger transcription factor 0.1 Archaeplastida
MA_14500g0010 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.09 Archaeplastida
MA_3931g0010 No alias PHD finger transcription factor 0.05 Archaeplastida
Mp2g04330.1 No alias PHD finger transcription factor 0.08 Archaeplastida
Mp6g21090.2 No alias PHD finger transcription factor 0.04 Archaeplastida
Pp3c11_24730V3.1 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.02 Archaeplastida
Pp3c14_7890V3.1 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.04 Archaeplastida
Pp3c1_22210V3.1 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.07 Archaeplastida
Pp3c25_4970V3.1 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.12 Archaeplastida
Pp3c25_9550V3.1 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.06 Archaeplastida
Solyc03g005170.3.1 No alias PHD finger transcription factor 0.03 Archaeplastida
Solyc09g065340.3.1 No alias PHD finger transcription factor 0.06 Archaeplastida
Solyc09g076010.3.1 No alias PHD finger transcription factor 0.06 Archaeplastida
Solyc10g083800.2.1 No alias PHD finger transcription factor 0.04 Archaeplastida
Solyc10g084650.3.1 No alias PHD finger transcription factor 0.03 Archaeplastida
Solyc11g066480.2.1 No alias PHD finger transcription factor 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0010921 regulation of phosphatase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0019902 phosphatase binding IEP Neighborhood
MF GO:0019903 protein phosphatase binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR032308 Jas 889 961
No external refs found!