Zm00001e005797_P001


Description : G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000101 (LandPlants) Phylogenetic Tree(s): OG_05_0000101_tree ,
OG_06_0000453 (SeedPlants) Phylogenetic Tree(s): OG_06_0000453_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e005797_P001
Cluster HCCA: Cluster_315

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00263730 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00044p00042560 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00048p00125480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00131p00063460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G32240 KAN2 Homeodomain-like superfamily protein 0.03 Archaeplastida
AT2G02060 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
AT2G40260 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
AT3G04030 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
AT4G04605 No alias No description available 0.02 Archaeplastida
AT5G06800 No alias myb-like HTH transcriptional regulator family protein 0.04 Archaeplastida
AT5G45580 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Cpa|evm.model.tig00020710.73 No alias No description available 0.01 Archaeplastida
GSVIVT01000606001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01005342001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01007064001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01009589001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.09 Archaeplastida
GSVIVT01020827001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01021072001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01021225001 No alias Putative Myb family transcription factor At1g14600... 0.07 Archaeplastida
GSVIVT01026319001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01033528001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_17469 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Gb_25174 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Gb_27262 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Gb_36677 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Gb_40510 No alias G2-like GARP transcription factor 0.05 Archaeplastida
LOC_Os02g07170.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os02g07770.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os02g46940.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os03g03760.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os03g20900.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os05g40960.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os06g35140.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os06g45890.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os08g06370.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os08g33050.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os08g33750.1 No alias G2-like GARP transcription factor 0.07 Archaeplastida
LOC_Os10g39550.1 No alias G2-like GARP transcription factor 0.05 Archaeplastida
MA_10432937g0010 No alias G2-like GARP transcription factor 0.08 Archaeplastida
MA_8183372g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Mp4g08700.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Pp3c10_13030V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c12_11150V3.1 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
Pp3c21_2850V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c22_8217V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c26_3290V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c26_6050V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c2_2200V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c3_10940V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c4_23130V3.1 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
Pp3c4_6870V3.1 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
Solyc02g076670.3.1 No alias Putative Myb family transcription factor At1g14600... 0.06 Archaeplastida
Solyc02g080730.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc02g080740.3.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Solyc03g006150.2.1 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
Solyc04g008480.2.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Solyc05g007890.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g066180.4.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc07g045000.4.1 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
Solyc08g076400.3.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc10g076460.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc10g078720.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc10g080460.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc11g022470.2.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Solyc12g006280.3.1 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
Zm00001e011962_P002 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e014339_P001 No alias Putative Myb family transcription factor At1g14600... 0.04 Archaeplastida
Zm00001e023282_P002 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e030364_P002 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e037761_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e040203_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!