Zm00001e005817_P003

Description : transcription factor (AP2)

Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000090 (LandPlants) Phylogenetic Tree(s): OG_05_0000090_tree ,
OG_06_0000054 (SeedPlants) Phylogenetic Tree(s): OG_06_0000054_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e005817_P003
Cluster	HCCA: Cluster_125

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00225230	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00024p00227390	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.09	Archaeplastida
AMTR_s00058p00216470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00065p00077750	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT3G20840	PLT1	Integrase-type DNA-binding superfamily protein	0.07	Archaeplastida
AT3G54320	WRI1, ATWRI1, ASML1, WRI	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G37750	DRG, CKC, CKC1, ANT	Integrase-type DNA-binding superfamily protein	0.09	Archaeplastida
AT5G10510	PLT3, AIL6	AINTEGUMENTA-like 6	0.03	Archaeplastida
AT5G65510	AIL7	AINTEGUMENTA-like 7	0.03	Archaeplastida
AT5G67180	TOE3	target of early activation tagged (EAT) 3	0.02	Archaeplastida
Cre08.g385350	No alias	No description available	0.02	Archaeplastida
Cre10.g441300	No alias	AP2-like ethylene-responsive transcription factor ANT...	0.02	Archaeplastida
GSVIVT01002536001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01004382001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01016764001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.08	Archaeplastida
GSVIVT01025100001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01029219001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_05487	No alias	transcription factor (AP2)	0.02	Archaeplastida
Gb_29561	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os01g59780.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
LOC_Os01g67410.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os02g40070.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os03g07940.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
LOC_Os03g12950.1	No alias	no description available(sp\|q84z02\|crl5_orysj : 102.0)	0.07	Archaeplastida
LOC_Os03g19900.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os03g56050.1	No alias	transcription factor (AP2)	0.15	Archaeplastida
LOC_Os04g55560.2	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os06g43220.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
LOC_Os06g44750.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os07g03250.1	No alias	transcription factor (AP2)	0.15	Archaeplastida
LOC_Os07g13170.2	No alias	transcription factor (AP2)	0.12	Archaeplastida
LOC_Os08g34360.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os11g19060.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
MA_113625g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_121578g0010	No alias	transcription factor (AP2)	0.03	Archaeplastida
MA_196219g0010	No alias	transcription factor (AP2)	0.05	Archaeplastida
MA_67041g0010	No alias	transcription factor (AP2)	0.02	Archaeplastida
MA_8090186g0010	No alias	transcription factor (AP2)	0.02	Archaeplastida
MA_86195g0010	No alias	transcription factor (AP2)	0.05	Archaeplastida
MA_98095g0010	No alias	transcription factor (AP2)	0.03	Archaeplastida
Mp7g13270.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
Mp8g11450.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Pp3c15_24980V3.1	No alias	AINTEGUMENTA-like 5	0.02	Archaeplastida
Pp3c15_4400V3.1	No alias	target of early activation tagged (EAT) 2	0.02	Archaeplastida
Pp3c9_25400V3.1	No alias	AINTEGUMENTA-like 5	0.02	Archaeplastida
Pp3c9_25570V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Smo419668	No alias	No description available	0.03	Archaeplastida
Solyc02g092050.3.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
Solyc03g123430.4.1	No alias	transcription factor (AP2)	0.08	Archaeplastida
Solyc04g077490.3.1	No alias	transcription factor (AP2)	0.08	Archaeplastida
Solyc05g051380.4.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
Solyc11g008560.2.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
Solyc11g010710.2.1	No alias	transcription factor (AP2)	0.08	Archaeplastida
Zm00001e000558_P003	No alias	transcription factor (AP2)	0.02	Archaeplastida
Zm00001e006752_P001	No alias	transcription factor (AP2)	0.04	Archaeplastida
Zm00001e024044_P002	No alias	transcription factor (AP2)	0.03	Archaeplastida
Zm00001e027593_P003	No alias	transcription factor (AP2)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003713	transcription coactivator activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004860	protein kinase inhibitor activity	IEP	Neighborhood
MF	GO:0004861	cyclin-dependent protein serine/threonine kinase inhibitor activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0007050	cell cycle arrest	IEP	Neighborhood
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0019207	kinase regulator activity	IEP	Neighborhood
MF	GO:0019210	kinase inhibitor activity	IEP	Neighborhood
MF	GO:0019887	protein kinase regulator activity	IEP	Neighborhood
BP	GO:0022402	cell cycle process	IEP	Neighborhood
MF	GO:0030291	protein serine/threonine kinase inhibitor activity	IEP	Neighborhood
CC	GO:0033643	host cell part	IEP	Neighborhood
CC	GO:0033646	host intracellular part	IEP	Neighborhood
CC	GO:0033647	host intracellular organelle	IEP	Neighborhood
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	Neighborhood
CC	GO:0042025	host cell nucleus	IEP	Neighborhood
CC	GO:0044217	other organism part	IEP	Neighborhood
BP	GO:0045786	negative regulation of cell cycle	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	404	458
IPR001471	AP2/ERF_dom	301	360

External Links

No external refs found!

Zm00001e005817_P003

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation