Zm00001e006040_P001

Description : AAA-ATPase At3g28580 OS=Arabidopsis thaliana (sp|q9ljj7|aatp9_arath : 425.0)

Gene families : OG0000095 (Archaeplastida) Phylogenetic Tree(s): OG0000095_tree ,
OG_05_0000059 (LandPlants) Phylogenetic Tree(s): OG_05_0000059_tree ,
OG_06_0000488 (SeedPlants) Phylogenetic Tree(s): OG_06_0000488_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e006040_P001
Cluster	HCCA: Cluster_62

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00244830	evm_27.TU.AmTr_v1...	AAA-ATPase At3g50940 OS=Arabidopsis thaliana	0.02	Archaeplastida
AMTR_s00036p00176790	evm_27.TU.AmTr_v1...	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana	0.04	Archaeplastida
AT2G18193	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.04	Archaeplastida
AT3G28510	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	Archaeplastida
AT3G28600	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.05	Archaeplastida
AT3G50930	BCS1	cytochrome BC1 synthesis	0.03	Archaeplastida
AT5G40000	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.05	Archaeplastida
AT5G57480	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Archaeplastida
GSVIVT01010371001	No alias	AAA-ATPase At5g17760 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01023810001	No alias	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01027397001	No alias	AAA-ATPase At2g46620 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01029545001	No alias	AAA-ATPase At3g50940 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01032552001	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01032557001	No alias	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana	0.03	Archaeplastida
Gb_02166	No alias	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.06	Archaeplastida
Gb_16063	No alias	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Gb_27548	No alias	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os01g42030.1	No alias	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.04	Archaeplastida
LOC_Os05g51130.1	No alias	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.03	Archaeplastida
LOC_Os07g09420.1	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.05	Archaeplastida
LOC_Os09g27340.1	No alias	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.05	Archaeplastida
LOC_Os12g28137.1	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os12g28177.1	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_10067279g0010	No alias	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_10430798g0010	No alias	AAA-ATPase At4g30250 OS=Arabidopsis thaliana...	0.04	Archaeplastida
MA_10435468g0020	No alias	AAA-ATPase At3g28510 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_165229g0020	No alias	AAA-ATPase At4g25835 OS=Arabidopsis thaliana...	0.05	Archaeplastida
MA_230170g0010	No alias	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.04	Archaeplastida
MA_354684g0010	No alias	AAA-ATPase At3g28510 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_5260g0010	No alias	AAA-ATPase At3g28510 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_716242g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
Pp3c12_21960V3.1	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	Archaeplastida
Pp3c8_710V3.1	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Archaeplastida
Smo75451	No alias	AAA-ATPase At3g28600 OS=Arabidopsis thaliana	0.02	Archaeplastida
Solyc02g062550.3.1	No alias	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.03	Archaeplastida
Solyc02g084900.2.1	No alias	AAA-ATPase At2g18193 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc02g087540.3.1	No alias	AAA-ATPase At3g28510 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc03g033840.4.1	No alias	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.02	Archaeplastida
Solyc10g007280.4.1	No alias	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.03	Archaeplastida
Zm00001e003358_P001	No alias	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.1	Archaeplastida
Zm00001e027961_P001	No alias	AAA-ATPase At3g50940 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Zm00001e034224_P001	No alias	AAA-ATPase At4g25835 OS=Arabidopsis thaliana...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
MF	GO:0010181	FMN binding	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR025753	AAA_N_dom	39	127
IPR003959	ATPase_AAA_core	262	410

External Links

No external refs found!

Zm00001e006040_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation