Zm00001e006089_P001


Description : no hits & (original description: none)


Gene families : OG0000610 (Archaeplastida) Phylogenetic Tree(s): OG0000610_tree ,
OG_05_0009836 (LandPlants) Phylogenetic Tree(s): OG_05_0009836_tree ,
OG_06_0008062 (SeedPlants) Phylogenetic Tree(s): OG_06_0008062_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e006089_P001
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00042p00185900 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00141p00085330 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00141p00087190 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00141p00103540 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT1G29980 No alias Protein of unknown function, DUF642 0.04 Archaeplastida
AT1G80240 No alias Protein of unknown function, DUF642 0.03 Archaeplastida
AT2G41800 No alias Protein of unknown function, DUF642 0.04 Archaeplastida
AT2G41810 No alias Protein of unknown function, DUF642 0.02 Archaeplastida
AT4G32460 No alias Protein of unknown function, DUF642 0.04 Archaeplastida
AT5G25460 No alias Protein of unknown function, DUF642 0.03 Archaeplastida
Gb_04470 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_11174 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g42520.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g55190.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g11040.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g59300.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g41740.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g04050.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g10620.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10435058g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_109913g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_44504g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_4501g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_89188g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g042930.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e020676_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e029029_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006946 DUF642 271 437
IPR006946 DUF642 102 259
No external refs found!