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  5. AT3G12430

AT3G12430


Description : Polynucleotidyl transferase, ribonuclease H-like superfamily protein


Gene families : OG0000660 (Archaeplastida) Phylogenetic Tree(s): OG0000660_tree ,
OG_05_0000878 (LandPlants) Phylogenetic Tree(s): OG_05_0000878_tree ,
OG_06_0000611 (SeedPlants) Phylogenetic Tree(s): OG_06_0000611_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G12430
Cluster HCCA: Cluster_268

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00231040 evm_27.TU.AmTr_v1... Werner Syndrome-like exonuclease OS=Arabidopsis thaliana 0.02 Archaeplastida
AT3G12420 No alias Polynucleotidyl transferase, ribonuclease H-like... 0.02 Archaeplastida
LOC_Os07g02170.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000719 photoreactive repair IEP Neighborhood
CC GO:0000808 origin recognition complex IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003913 DNA photolyase activity IEP Neighborhood
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006290 pyrimidine dimer repair IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0008219 cell death IEP Neighborhood
MF GO:0008474 palmitoyl-(protein) hydrolase activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009186 deoxyribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009566 fertilization IEP Neighborhood
BP GO:0009567 double fertilization forming a zygote and endosperm IEP Neighborhood
BP GO:0009650 UV protection IEP Neighborhood
CC GO:0009898 cytoplasmic side of plasma membrane IEP Neighborhood
BP GO:0010098 suspensor development IEP Neighborhood
MF GO:0010175 sphingosine transmembrane transporter activity IEP Neighborhood
BP GO:0010466 negative regulation of peptidase activity IEP Neighborhood
BP GO:0010951 negative regulation of endopeptidase activity IEP Neighborhood
MF GO:0015101 organic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015166 polyol transmembrane transporter activity IEP Neighborhood
MF GO:0015204 urea transmembrane transporter activity IEP Neighborhood
MF GO:0015665 alcohol transmembrane transporter activity IEP Neighborhood
BP GO:0015840 urea transport IEP Neighborhood
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Neighborhood
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Neighborhood
BP GO:0019755 one-carbon compound transport IEP Neighborhood
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0030154 cell differentiation IEP Neighborhood
BP GO:0030162 regulation of proteolysis IEP Neighborhood
MF GO:0032442 phenylcoumaran benzylic ether reductase activity IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045861 negative regulation of proteolysis IEP Neighborhood
MF GO:0046624 sphingolipid transporter activity IEP Neighborhood
BP GO:0048235 pollen sperm cell differentiation IEP Neighborhood
CC GO:0048555 generative cell nucleus IEP Neighborhood
BP GO:0048598 embryonic morphogenesis IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
BP GO:0051346 negative regulation of hydrolase activity IEP Neighborhood
BP GO:0051865 protein autoubiquitination IEP Neighborhood
BP GO:0052547 regulation of peptidase activity IEP Neighborhood
BP GO:0052548 regulation of endopeptidase activity IEP Neighborhood
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Neighborhood
BP GO:0080159 zygote elongation IEP Neighborhood
CC GO:0098552 side of membrane IEP Neighborhood
CC GO:0098562 cytoplasmic side of membrane IEP Neighborhood
MF GO:0098599 palmitoyl hydrolase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!