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  5. Zm00001e006210_P001

Zm00001e006210_P001


Description : A-class RAB GTPase


Gene families : OG0000173 (Archaeplastida) Phylogenetic Tree(s): OG0000173_tree ,
OG_05_0000161 (LandPlants) Phylogenetic Tree(s): OG_05_0000161_tree ,
OG_06_0000127 (SeedPlants) Phylogenetic Tree(s): OG_06_0000127_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e006210_P001
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
AT1G28550 RABA1i, AtRABA1i RAB GTPase homolog A1I 0.02 Archaeplastida
AT2G33870 ArRABA1h RAB GTPase homolog A1H 0.02 Archaeplastida
AT4G39990 ATRABA4B, ATGB3,... RAB GTPase homolog A4B 0.04 Archaeplastida
AT5G59150 ATRAB-A2D,... RAB GTPase homolog A2D 0.02 Archaeplastida
AT5G65270 AtRABA4a, RABA4a RAB GTPase homolog A4A 0.03 Archaeplastida
LOC_Os05g01480.1 No alias A-class RAB GTPase 0.03 Archaeplastida
LOC_Os09g35860.1 No alias A-class RAB GTPase 0.03 Archaeplastida
LOC_Os10g23100.1 No alias A-class RAB GTPase 0.03 Archaeplastida
Pp3c14_15250V3.1 No alias RAB GTPase homolog A2B 0.03 Archaeplastida
Pp3c1_28210V3.1 No alias RAB GTPase homolog A2B 0.03 Archaeplastida
Pp3c20_15610V3.1 No alias RAB GTPase homolog A4D 0.04 Archaeplastida
Solyc10g045550.2.1 No alias A-class RAB GTPase 0.03 Archaeplastida
Solyc11g010100.2.1 No alias A-class RAB GTPase 0.04 Archaeplastida
Zm00001e020213_P001 No alias A-class RAB GTPase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
CC GO:0072546 ER membrane protein complex IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR001806 Small_GTPase 14 174
No external refs found!