Zm00001e006224_P001


Description : regulator (GIL1) of phytochrome-mediated agravitropism


Gene families : OG0000772 (Archaeplastida) Phylogenetic Tree(s): OG0000772_tree ,
OG_05_0000456 (LandPlants) Phylogenetic Tree(s): OG_05_0000456_tree ,
OG_06_0008032 (SeedPlants) Phylogenetic Tree(s): OG_06_0008032_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e006224_P001
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AT2G30380 No alias Plant protein of unknown function (DUF641) 0.03 Archaeplastida
AT3G60680 No alias Plant protein of unknown function (DUF641) 0.03 Archaeplastida
GSVIVT01024812001 No alias Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_22635 No alias regulator (GIL1) of phytochrome-mediated agravitropism 0.03 Archaeplastida
LOC_Os01g10680.1 No alias Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis... 0.08 Archaeplastida
LOC_Os03g61040.1 No alias regulator (GIL1) of phytochrome-mediated agravitropism 0.11 Archaeplastida
LOC_Os05g11650.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc02g083110.1.1 No alias regulator (GIL1) of phytochrome-mediated agravitropism 0.04 Archaeplastida
Solyc07g062310.4.1 No alias Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e012578_P001 No alias Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e031256_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006943 DUF641_pln 97 214
No external refs found!