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  5. Zm00001e006287_P001

Zm00001e006287_P001


Description : RNA chaperone (RZ1|GR-RBP)


Gene families : OG0000043 (Archaeplastida) Phylogenetic Tree(s): OG0000043_tree ,
OG_05_0000481 (LandPlants) Phylogenetic Tree(s): OG_05_0000481_tree ,
OG_06_0001149 (SeedPlants) Phylogenetic Tree(s): OG_06_0001149_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e006287_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00251200 evm_27.TU.AmTr_v1... Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00013p00256900 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 Archaeplastida
AMTR_s00030p00132070 evm_27.TU.AmTr_v1... Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana 0.01 Archaeplastida
AMTR_s00030p00198740 evm_27.TU.AmTr_v1... Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00154p00024620 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.01 Archaeplastida
AT5G04280 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.07 Archaeplastida
GSVIVT01001672001 No alias Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana 0.07 Archaeplastida
Gb_40269 No alias RNA chaperone (RZ1|GR-RBP) 0.11 Archaeplastida
LOC_Os07g08960.1 No alias RNA chaperone (RZ1|GR-RBP) 0.06 Archaeplastida
MA_10428777g0010 No alias Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba... 0.08 Archaeplastida
MA_10436424g0010 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Archaeplastida
MA_168323g0010 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Archaeplastida
Pp3c12_1830V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.05 Archaeplastida
Pp3c17_4050V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.02 Archaeplastida
Solyc01g104840.4.1 No alias RNA chaperone (RZ1|GR-RBP) 0.03 Archaeplastida
Solyc03g071560.4.1 No alias RNA chaperone (RZ1|GR-RBP) 0.04 Archaeplastida
Solyc10g047130.2.1 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Archaeplastida
Solyc10g081180.2.1 No alias RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) 0.04 Archaeplastida
Zm00001e033010_P001 No alias RNA chaperone (RZ1|GR-RBP) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 10 78
IPR001878 Znf_CCHC 130 145
No external refs found!