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  5. Zm00001e006681_P001

Zm00001e006681_P001


Description : component ADA1 of SAGA transcription co-activator complex


Gene families : OG0001266 (Archaeplastida) Phylogenetic Tree(s): OG0001266_tree ,
OG_05_0000955 (LandPlants) Phylogenetic Tree(s): OG_05_0000955_tree ,
OG_06_0004777 (SeedPlants) Phylogenetic Tree(s): OG_06_0004777_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e006681_P001
Cluster HCCA: Cluster_276

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01035521001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.06 Archaeplastida
GSVIVT01037861001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida
LOC_Os04g56300.1 No alias component ADA1 of SAGA transcription co-activator complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0070461 SAGA-type complex IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
InterPro domains Description Start Stop
IPR024738 Hfi1/Tada1 28 331
No external refs found!