1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e007122_P001

Zm00001e007122_P001


Description : E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana (sp|q9ly41|atl4_arath : 87.0)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0009793 (LandPlants) Phylogenetic Tree(s): OG_05_0009793_tree ,
OG_06_0006967 (SeedPlants) Phylogenetic Tree(s): OG_06_0006967_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e007122_P001
Cluster HCCA: Cluster_425

Target Alias Description ECC score Gene Family Method Actions
Gb_28980 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os02g46600.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g54830.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os03g28080.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
LOC_Os04g16970.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os04g49700.1 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os06g07100.2 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os07g23970.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_117647g0010 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
MA_125507g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Pp3c6_19030V3.1 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Solyc09g066300.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e002233_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e014286_P001 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Zm00001e017959_P001 No alias RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e030102_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e036691_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e038107_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 146 189
No external refs found!