Zm00001e007152_P001

Description : transcription factor (RAV/NGATHA)

Gene families : OG0000363 (Archaeplastida) Phylogenetic Tree(s): OG0000363_tree ,
OG_05_0000191 (LandPlants) Phylogenetic Tree(s): OG_05_0000191_tree ,
OG_06_0013135 (SeedPlants) Phylogenetic Tree(s): OG_06_0013135_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e007152_P001
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
AT1G68840	EDF2, AtRAV2,...	related to ABI3/VP1 2	0.07	Archaeplastida
AT3G11580	No alias	AP2/B3-like transcriptional factor family protein	0.03	Archaeplastida
MA_3834g0010	No alias	transcription factor (RAV/NGATHA)	0.04	Archaeplastida
Smo71153	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.01	Archaeplastida
Solyc05g004000.1.1	No alias	transcription factor (RAV/NGATHA)	0.01	Archaeplastida
Solyc05g009790.1.1	No alias	transcription factor (RAV/NGATHA). transcription factor (AP2-RAV)	0.02	Archaeplastida
Solyc08g013690.1.1	No alias	transcription factor (RAV/NGATHA)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	94	198

External Links

No external refs found!