Description : transcription factor (RAV/NGATHA)

Gene families : OG0000363 (Archaeplastida) Phylogenetic Tree(s): OG0000363_tree ,
OG_05_0000191 (LandPlants) Phylogenetic Tree(s): OG_05_0000191_tree ,
OG_06_0013135 (SeedPlants) Phylogenetic Tree(s): OG_06_0013135_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Zm00001e007152_P001
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AT1G68840 EDF2, AtRAV2,... related to ABI3/VP1 2 0.07 Archaeplastida
AT3G11580 No alias AP2/B3-like transcriptional factor family protein 0.03 Archaeplastida
MA_3834g0010 No alias transcription factor (RAV/NGATHA) 0.04 Archaeplastida
Smo71153 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 Archaeplastida
Solyc05g004000.1.1 No alias transcription factor (RAV/NGATHA) 0.01 Archaeplastida
Solyc05g009790.1.1 No alias transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.02 Archaeplastida
Solyc08g013690.1.1 No alias transcription factor (RAV/NGATHA) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 94 198
No external refs found!