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  5. Zm00001e007219_P001

Zm00001e007219_P001


Description : protease (RBL)


Gene families : OG0000617 (Archaeplastida) Phylogenetic Tree(s): OG0000617_tree ,
OG_05_0000454 (LandPlants) Phylogenetic Tree(s): OG_05_0000454_tree ,
OG_06_0000396 (SeedPlants) Phylogenetic Tree(s): OG_06_0000396_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e007219_P001
Cluster HCCA: Cluster_286

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00097470 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.03 Archaeplastida
AT1G63120 RBL2, ATRBL2 RHOMBOID-like 2 0.02 Archaeplastida
Cpa|evm.model.tig00000254.82 No alias Protein degradation.peptidase families.serine-type... 0.01 Archaeplastida
GSVIVT01008957001 No alias Protein degradation.peptidase families.serine-type... 0.03 Archaeplastida
GSVIVT01034160001 No alias Protein degradation.peptidase families.serine-type... 0.02 Archaeplastida
LOC_Os01g05430.1 No alias protease (RBL) 0.03 Archaeplastida
LOC_Os08g43320.1 No alias protease (RBL) 0.02 Archaeplastida
LOC_Os10g37760.1 No alias protease (RBL) 0.07 Archaeplastida
LOC_Os11g47840.1 No alias protease (RBL) 0.04 Archaeplastida
Pp3c17_14100V3.1 No alias RHOMBOID-like 1 0.02 Archaeplastida
Solyc11g013320.2.1 No alias protease (RBL) 0.04 Archaeplastida
Zm00001e003245_P001 No alias protease (RBL) 0.04 Archaeplastida
Zm00001e024265_P001 No alias protease (RBL) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 127 268
No external refs found!