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  5. Zm00001e007438_P001

Zm00001e007438_P001


Description : beta-class expansin


Gene families : OG0000383 (Archaeplastida) Phylogenetic Tree(s): OG0000383_tree ,
OG_05_0000369 (LandPlants) Phylogenetic Tree(s): OG_05_0000369_tree ,
OG_06_0005944 (SeedPlants) Phylogenetic Tree(s): OG_06_0005944_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e007438_P001
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AT4G28250 EXPB3, ATEXPB3,... expansin B3 0.03 Archaeplastida
LOC_Os02g42650.1 No alias beta-class expansin 0.04 Archaeplastida
LOC_Os03g01270.1 No alias Expansin-B7 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os03g44290.1 No alias Expansin-B12 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os04g44780.1 No alias Expansin-B17 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os10g40730.1 No alias Expansin-B4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_21214g0010 No alias beta-class expansin 0.03 Archaeplastida
MA_9323664g0010 No alias Expansin-B3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c17_12970V3.1 No alias expansin B3 0.02 Archaeplastida
Pp3c17_12980V3.1 No alias expansin B3 0.02 Archaeplastida
Pp3c1_37980V3.1 No alias expansin B3 0.03 Archaeplastida
Pp3c22_17770V3.1 No alias expansin B3 0.03 Archaeplastida
Zm00001e037879_P001 No alias Expansin-B3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP Neighborhood
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 83 149
IPR007117 Expansin_CBD 174 255
No external refs found!