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  5. Zm00001e007472_P001

Zm00001e007472_P001


Description : transcription factor (TUB)


Gene families : OG0000335 (Archaeplastida) Phylogenetic Tree(s): OG0000335_tree ,
OG_05_0071058 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0065063 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e007472_P001
Cluster HCCA: Cluster_293

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00040910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TUB... 0.04 Archaeplastida
AMTR_s00057p00153680 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TUB... 0.03 Archaeplastida
AT2G47900 AtTLP3, TLP3 tubby like protein 3 0.02 Archaeplastida
Cpa|evm.model.tig00020603.38 No alias RNA biosynthesis.transcriptional activation.TUB... 0.01 Archaeplastida
Gb_35372 No alias transcription factor (TUB) 0.03 Archaeplastida
LOC_Os02g47640.1 No alias transcription factor (TUB) 0.03 Archaeplastida
LOC_Os03g22800.1 No alias transcription factor (TUB) 0.03 Archaeplastida
LOC_Os04g59130.1 No alias transcription factor (TUB) 0.04 Archaeplastida
LOC_Os05g36190.1 No alias transcription factor (TUB) 0.04 Archaeplastida
Pp3c8_18450V3.1 No alias tubby like protein 3 0.03 Archaeplastida
Solyc01g067680.3.1 No alias transcription factor (TUB) 0.03 Archaeplastida
Solyc09g074510.3.1 No alias transcription factor (TUB) 0.04 Archaeplastida
Zm00001e016851_P001 No alias transcription factor (TUB) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
InterPro domains Description Start Stop
IPR000007 Tubby_C 266 587
IPR001810 F-box_dom 202 255
No external refs found!