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  5. Zm00001e007504_P002

Zm00001e007504_P002


Description : DDB1- and CUL4-associated factor homolog 1 OS=Arabidopsis thaliana (sp|q9m086|dcaf1_arath : 680.0)


Gene families : OG0005040 (Archaeplastida) Phylogenetic Tree(s): OG0005040_tree ,
OG_05_0004694 (LandPlants) Phylogenetic Tree(s): OG_05_0004694_tree ,
OG_06_0007567 (SeedPlants) Phylogenetic Tree(s): OG_06_0007567_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e007504_P002
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00130610 evm_27.TU.AmTr_v1... DDB1- and CUL4-associated factor homolog 1... 0.02 Archaeplastida
GSVIVT01035587001 No alias DDB1- and CUL4-associated factor homolog 1... 0.04 Archaeplastida
Gb_32239 No alias DDB1- and CUL4-associated factor homolog 1... 0.02 Archaeplastida
LOC_Os04g59460.1 No alias DDB1- and CUL4-associated factor homolog 1... 0.03 Archaeplastida
MA_10435370g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c2_24840V3.1 No alias DDB1-CUL4 associated factor 1 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!