Description : subunit 1 of Pol III RNA polymerase
Gene families : OG0000599 (Archaeplastida) Phylogenetic Tree(s): OG0000599_tree ,
OG_05_0006324 (LandPlants) Phylogenetic Tree(s): OG_05_0006324_tree ,
OG_06_0006832 (SeedPlants) Phylogenetic Tree(s): OG_06_0006832_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e007729_P001 | |
Cluster | HCCA: Cluster_61 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00152770 | evm_27.TU.AmTr_v1... | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.02 | Archaeplastida | |
AMTR_s00023p00196820 | evm_27.TU.AmTr_v1... | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.05 | Archaeplastida | |
Cpa|evm.model.tig00000241.15 | No alias | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.03 | Archaeplastida | |
Cpa|evm.model.tig00022075.6 | No alias | DNA-directed RNA polymerase III subunit 1 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
Cre03.g165750 | No alias | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.01 | Archaeplastida | |
GSVIVT01025079001 | No alias | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.06 | Archaeplastida | |
Gb_21425 | No alias | subunit 1 of Pol V RNA polymerase | 0.04 | Archaeplastida | |
LOC_Os05g05860.1 | No alias | subunit 1 of Pol II RNA polymerase | 0.03 | Archaeplastida | |
MA_8544g0010 | No alias | subunit 1 of Pol II RNA polymerase | 0.03 | Archaeplastida | |
Mp3g15530.1 | No alias | subunit 1 of Pol IV RNA polymerase. subunit 1 of Pol V... | 0.02 | Archaeplastida | |
Mp4g14340.1 | No alias | subunit 1 of Pol II RNA polymerase | 0.02 | Archaeplastida | |
Pp3c15_5270V3.1 | No alias | nuclear RNA polymerase D1B | 0.04 | Archaeplastida | |
Pp3c17_4860V3.1 | No alias | nuclear RNA polymerase C1 | 0.02 | Archaeplastida | |
Pp3c1_32300V3.1 | No alias | RNA polymerase II large subunit | 0.04 | Archaeplastida | |
Smo110201 | No alias | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEA | Interproscan |
BP | GO:0006351 | transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | Neighborhood |
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Neighborhood |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood |
BP | GO:0006396 | RNA processing | IEP | Neighborhood |
BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Neighborhood |
MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
MF | GO:0008237 | metallopeptidase activity | IEP | Neighborhood |
BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
BP | GO:0016579 | protein deubiquitination | IEP | Neighborhood |
MF | GO:0016859 | cis-trans isomerase activity | IEP | Neighborhood |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | Neighborhood |
BP | GO:0018208 | peptidyl-proline modification | IEP | Neighborhood |
MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Neighborhood |
CC | GO:0030684 | preribosome | IEP | Neighborhood |
CC | GO:0032040 | small-subunit processome | IEP | Neighborhood |
MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Neighborhood |
BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
BP | GO:0070646 | protein modification by small protein removal | IEP | Neighborhood |
MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Neighborhood |
No external refs found! |