Zm00001e008040_P002


Description : transcription factor (ARF)


Gene families : OG0000080 (Archaeplastida) Phylogenetic Tree(s): OG0000080_tree ,
OG_05_0000395 (LandPlants) Phylogenetic Tree(s): OG_05_0000395_tree ,
OG_06_0003855 (SeedPlants) Phylogenetic Tree(s): OG_06_0003855_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e008040_P002
Cluster HCCA: Cluster_367

Target Alias Description ECC score Gene Family Method Actions
Zm00001e006640_P002 No alias transcription factor (ARF) 0.04 Archaeplastida
Zm00001e032135_P002 No alias transcription factor (ARF) 0.08 Archaeplastida
Zm00001e041866_P001 No alias transcription factor (ARF) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
BP GO:0009725 response to hormone IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 150 250
IPR010525 Auxin_resp 276 361
IPR033389 AUX/IAA_dom 561 660
No external refs found!