Zm00001e008055_P001


Description : pectin methylesterase


Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0001525 (LandPlants) Phylogenetic Tree(s): OG_05_0001525_tree ,
OG_06_0001343 (SeedPlants) Phylogenetic Tree(s): OG_06_0001343_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e008055_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00101250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.01 Archaeplastida
AMTR_s00129p00035520 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
AT1G53840 PME1, ATPME1 pectin methylesterase 1 0.02 Archaeplastida
AT2G45220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT3G47400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 Archaeplastida
AT5G49180 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 Archaeplastida
GSVIVT01017687001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.01 Archaeplastida
GSVIVT01023135001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01028265001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.01 Archaeplastida
GSVIVT01031165001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.01 Archaeplastida
Gb_18512 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os07g47830.1 No alias pectin methylesterase 0.02 Archaeplastida
MA_10436266g0010 No alias Pectinesterase 3 OS=Citrus sinensis... 0.03 Archaeplastida
Solyc05g047590.4.1 No alias pectin methylesterase 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 170 465
No external refs found!