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  5. Zm00001e008064_P001

Zm00001e008064_P001


Description : U-box domain-containing protein 27 OS=Arabidopsis thaliana (sp|q9flf4|pub27_arath : 97.8)


Gene families : OG0000112 (Archaeplastida) Phylogenetic Tree(s): OG0000112_tree ,
OG_05_0012819 (LandPlants) Phylogenetic Tree(s): OG_05_0012819_tree ,
OG_06_0012815 (SeedPlants) Phylogenetic Tree(s): OG_06_0012815_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e008064_P001
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
Gb_02634 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.02 Archaeplastida
Gb_11650 No alias U-box domain-containing protein 26 OS=Arabidopsis... 0.04 Archaeplastida
Gb_29938 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Mp3g01700.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 Archaeplastida
Mp3g11730.1 No alias E3 ubiquitin ligase (PUB) 0.04 Archaeplastida
Zm00001e036030_P001 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003613 Ubox_domain 3 72
No external refs found!