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  5. Zm00001e008324_P001

Zm00001e008324_P001


Description : component TIR1/AFB of auxin receptor complex. component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0000271 (Archaeplastida) Phylogenetic Tree(s): OG0000271_tree ,
OG_05_0000806 (LandPlants) Phylogenetic Tree(s): OG_05_0000806_tree ,
OG_06_0000796 (SeedPlants) Phylogenetic Tree(s): OG_06_0000796_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e008324_P001
Cluster HCCA: Cluster_313

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00126140 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT3G62980 TIR1 F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT5G49980 AFB5 auxin F-box protein 5 0.03 Archaeplastida
Gb_04516 No alias component TIR1/AFB of auxin receptor complex. component... 0.04 Archaeplastida
LOC_Os11g31620.1 No alias component TIR1/AFB of auxin receptor complex. component... 0.03 Archaeplastida
MA_10428988g0010 No alias component COI of jasmonic acid receptor complex 0.05 Archaeplastida
MA_10436355g0010 No alias Coronatine-insensitive protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_47869g0020 No alias F-box protein FBX14 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_646265g0010 No alias Coronatine-insensitive protein homolog 1a OS=Oryza... 0.03 Archaeplastida
MA_78902g0010 No alias component TIR1/AFB of auxin receptor complex 0.02 Archaeplastida
MA_92309g0010 No alias component TIR1/AFB of auxin receptor complex. component... 0.04 Archaeplastida
Mp2g26590.1 No alias component COI of jasmonic acid receptor complex 0.03 Archaeplastida
Mp6g02750.1 No alias component TIR1/AFB of auxin receptor complex. component... 0.02 Archaeplastida
Pp3c20_17150V3.1 No alias auxin signaling F-box 3 0.02 Archaeplastida
Smo104859 No alias Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Zm00001e023831_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.03 Archaeplastida
Zm00001e038839_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
BP GO:0015689 molybdate ion transport IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0070461 SAGA-type complex IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!