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  5. Zm00001e008393_P001

Zm00001e008393_P001


Description : transcription factor (bHLH). iron uptake transcription factor FIT


Gene families : OG0000184 (Archaeplastida) Phylogenetic Tree(s): OG0000184_tree ,
OG_05_0000297 (LandPlants) Phylogenetic Tree(s): OG_05_0000297_tree ,
OG_06_0001361 (SeedPlants) Phylogenetic Tree(s): OG_06_0001361_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e008393_P001
Cluster HCCA: Cluster_312

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00056000 evm_27.TU.AmTr_v1... Nutrient uptake.iron uptake.reduction-based strategy... 0.02 Archaeplastida
AT2G16910 AMS basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT2G28160 ATBHLH029,... FER-like regulator of iron uptake 0.03 Archaeplastida
AT4G29930 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT5G65640 bHLH093 beta HLH protein 93 0.03 Archaeplastida
GSVIVT01009234001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
GSVIVT01013744001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01013745001 No alias Transcription factor bHLH90 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_36380 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os02g02820.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os04g23550.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os11g32100.1 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.02 Archaeplastida
MA_28638g0010 No alias transcription factor (bHLH) 0.05 Archaeplastida
MA_439607g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_89559g0010 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_89559g0020 No alias Transcription factor ABORTED MICROSPORES OS=Arabidopsis... 0.03 Archaeplastida
Mp2g02460.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp8g06230.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Pp3c1_20960V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c3_15850V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c8_18070V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Smo91237 No alias External stimuli response.temperature.ICE-CBF cold... 0.03 Archaeplastida
Solyc05g014590.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc06g051550.4.1 No alias transcription factor (bHLH). iron uptake transcription factor FIT 0.04 Archaeplastida
Solyc07g018010.3.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc12g088130.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
MF GO:0009916 alternative oxidase activity IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030597 RNA glycosylase activity IEP Neighborhood
MF GO:0030598 rRNA N-glycosylase activity IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 156 200
No external refs found!