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  5. Zm00001e008766_P001

Zm00001e008766_P001


Description : component Sec24 of Sec23/24 cargo adaptor subcomplex


Gene families : OG0001187 (Archaeplastida) Phylogenetic Tree(s): OG0001187_tree ,
OG_05_0003933 (LandPlants) Phylogenetic Tree(s): OG_05_0003933_tree ,
OG_06_0005426 (SeedPlants) Phylogenetic Tree(s): OG_06_0005426_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e008766_P001
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00084390 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.13 Archaeplastida
AMTR_s00071p00045940 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.09 Archaeplastida
AT3G07100 ERMO2, SEC24A Sec23/Sec24 protein transport family protein 0.12 Archaeplastida
AT3G44340 CEF clone eighty-four 0.07 Archaeplastida
AT4G32640 No alias Sec23/Sec24 protein transport family protein 0.07 Archaeplastida
Cpa|evm.model.tig00000829.3 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 Archaeplastida
Cre01.g035850 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.05 Archaeplastida
Cre02.g091150 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 Archaeplastida
GSVIVT01014261001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.13 Archaeplastida
GSVIVT01014611001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.16 Archaeplastida
Gb_11357 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.08 Archaeplastida
Gb_26869 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.03 Archaeplastida
Gb_38621 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.15 Archaeplastida
LOC_Os04g04020.1 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.17 Archaeplastida
LOC_Os12g24250.1 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.15 Archaeplastida
MA_10430919g0010 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.11 Archaeplastida
MA_10434705g0010 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.16 Archaeplastida
MA_45050g0010 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.04 Archaeplastida
MA_923164g0010 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.12 Archaeplastida
Mp7g13350.1 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.05 Archaeplastida
Mp7g13560.1 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.12 Archaeplastida
Pp3c1_17880V3.1 No alias Sec23/Sec24 protein transport family protein 0.03 Archaeplastida
Pp3c1_22750V3.1 No alias Sec23/Sec24 protein transport family protein 0.03 Archaeplastida
Pp3c1_22900V3.1 No alias clone eighty-four 0.08 Archaeplastida
Pp3c2_16660V3.1 No alias Sec23/Sec24 protein transport family protein 0.06 Archaeplastida
Smo140536 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.11 Archaeplastida
Smo157789 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.06 Archaeplastida
Solyc02g082220.3.1 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.17 Archaeplastida
Solyc06g084210.3.1 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.08 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 ER to Golgi vesicle-mediated transport IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0010921 regulation of phosphatase activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
CC GO:0017119 Golgi transport complex IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0019902 phosphatase binding IEP Neighborhood
MF GO:0019903 protein phosphatase binding IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030131 clathrin adaptor complex IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR006900 Sec23/24_helical_dom 748 851
IPR006896 Sec23/24_trunk_dom 411 647
IPR012990 Sec23_24_beta_S 653 736
IPR006895 Znf_Sec23_Sec24 337 374
No external refs found!