Zm00001e009121_P001

Description : transcription factor (WOX)

Gene families : OG0000425 (Archaeplastida) Phylogenetic Tree(s): OG0000425_tree ,
OG_05_0000212 (LandPlants) Phylogenetic Tree(s): OG_05_0000212_tree ,
OG_06_0000309 (SeedPlants) Phylogenetic Tree(s): OG_06_0000309_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e009121_P001
Cluster	HCCA: Cluster_188

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00122680	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.02	Archaeplastida
AMTR_s00023p00181320	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.04	Archaeplastida
AMTR_s00051p00020930	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.05	Archaeplastida
AT1G46480	WOX4	WUSCHEL related homeobox 4	0.02	Archaeplastida
AT2G01500	PFS2, HOS9, WOX6	Homeodomain-like superfamily protein	0.07	Archaeplastida
AT2G17950	WUS, PGA6, WUS1	Homeodomain-like superfamily protein	0.04	Archaeplastida
AT2G28610	WOX3, PRS1, PRS	Homeodomain-like superfamily protein	0.07	Archaeplastida
AT2G33880	STIP, HB-3, WOX9	homeobox-3	0.07	Archaeplastida
AT3G03660	WOX11	WUSCHEL related homeobox 11	0.04	Archaeplastida
AT3G11260	WOX5	WUSCHEL related homeobox 5	0.05	Archaeplastida
AT3G18010	WOX1	WUSCHEL related homeobox 1	0.03	Archaeplastida
AT5G05770	WOX7	WUSCHEL related homeobox 7	0.05	Archaeplastida
AT5G46010	No alias	Homeodomain-like superfamily protein	0.03	Archaeplastida
GSVIVT01008424001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.05	Archaeplastida
GSVIVT01009453001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.05	Archaeplastida
GSVIVT01016360001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
GSVIVT01018787001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
GSVIVT01025075001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.05	Archaeplastida
GSVIVT01029942001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.07	Archaeplastida
Gb_01484	No alias	transcription factor (WOX)	0.02	Archaeplastida
Gb_12565	No alias	transcription factor (WOX)	0.02	Archaeplastida
Gb_29958	No alias	transcription factor (WOX)	0.03	Archaeplastida
LOC_Os01g62310.1	No alias	transcription factor (WOX)	0.03	Archaeplastida
LOC_Os03g20910.1	No alias	transcription factor (WOX)	0.03	Archaeplastida
LOC_Os04g56780.1	No alias	transcription factor (WOX)	0.08	Archaeplastida
LOC_Os05g02730.1	No alias	transcription factor (WOX)	0.06	Archaeplastida
LOC_Os05g48990.1	No alias	transcription factor (WOX)	0.03	Archaeplastida
LOC_Os07g48560.1	No alias	transcription factor (WOX)	0.03	Archaeplastida
MA_10234279g0010	No alias	transcription factor (WOX)	0.02	Archaeplastida
MA_10344604g0010	No alias	transcription factor (WOX)	0.03	Archaeplastida
MA_121643g0010	No alias	transcription factor (WOX)	0.02	Archaeplastida
MA_33318g0010	No alias	transcription factor (WOX)	0.03	Archaeplastida
MA_42637g0010	No alias	transcription factor (WOX)	0.02	Archaeplastida
MA_8832398g0010	No alias	transcription factor (WOX)	0.03	Archaeplastida
Solyc02g077390.2.1	No alias	transcription factor (WOX)	0.02	Archaeplastida
Solyc03g118770.4.1	No alias	transcription factor (WOX)	0.03	Archaeplastida
Solyc04g078650.4.1	No alias	transcription factor (WOX)	0.05	Archaeplastida
Solyc06g072890.3.1	No alias	transcription factor (WOX)	0.02	Archaeplastida
Solyc06g075567.1.1	No alias	transcription factor (WOX)	0.06	Archaeplastida
Solyc11g072770.2.1	No alias	transcription factor (WOX)	0.05	Archaeplastida
Solyc11g072790.2.1	No alias	transcription factor (WOX)	0.04	Archaeplastida
Zm00001e001527_P001	No alias	transcription factor (WOX)	0.04	Archaeplastida
Zm00001e006644_P002	No alias	transcription factor (WOX)	0.05	Archaeplastida
Zm00001e032433_P003	No alias	transcription factor (WOX)	0.07	Archaeplastida
Zm00001e041785_P001	No alias	transcription factor (WOX)	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0004497	monooxygenase activity	IEP	Neighborhood
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
CC	GO:0033643	host cell part	IEP	Neighborhood
CC	GO:0033646	host intracellular part	IEP	Neighborhood
CC	GO:0033647	host intracellular organelle	IEP	Neighborhood
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
CC	GO:0042025	host cell nucleus	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
CC	GO:0043226	organelle	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043229	intracellular organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
CC	GO:0044217	other organism part	IEP	Neighborhood
CC	GO:0044424	intracellular part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	7	66

External Links

No external refs found!

Zm00001e009121_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation