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  5. Zm00001e009294_P001

Zm00001e009294_P001


Description : Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana (sp|q700d9|mybf_arath : 89.4)


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000101 (LandPlants) Phylogenetic Tree(s): OG_05_0000101_tree ,
OG_06_0000391 (SeedPlants) Phylogenetic Tree(s): OG_06_0000391_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e009294_P001
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00042560 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00094p00028710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00106p00040830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G69580 No alias Homeodomain-like superfamily protein 0.05 Archaeplastida
AT2G06020 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT2G40260 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT4G04605 No alias No description available 0.04 Archaeplastida
AT5G06800 No alias myb-like HTH transcriptional regulator family protein 0.04 Archaeplastida
AT5G45580 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
GSVIVT01005342001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01012707001 No alias No description available 0.05 Archaeplastida
GSVIVT01021072001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01021225001 No alias Putative Myb family transcription factor At1g14600... 0.05 Archaeplastida
GSVIVT01033381001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01036717001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_17469 No alias G2-like GARP transcription factor 0.06 Archaeplastida
Gb_25991 No alias G2-like GARP transcription factor 0.09 Archaeplastida
Gb_27262 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os02g46940.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os05g40960.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os06g35140.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os06g45890.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os08g33750.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os09g23200.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os10g39550.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_10432937g0010 No alias G2-like GARP transcription factor 0.06 Archaeplastida
MA_138039g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_15920g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_28188g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_8183372g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_937875g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Pp3c13_23440V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c21_2850V3.1 No alias Homeodomain-like superfamily protein 0.06 Archaeplastida
Pp3c22_8217V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c24_7590V3.1 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
Pp3c8_16910V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c8_8720V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Smo270428 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Smo405704 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
Solyc02g076670.3.1 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
Solyc02g080740.3.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Solyc04g008480.2.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Solyc07g045000.4.1 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
Solyc08g076400.3.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Solyc10g076460.2.1 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Solyc10g078720.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e003093_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e013758_P003 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e037731_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e040203_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e041868_P002 No alias G2-like GARP transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 60 110
No external refs found!