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Description : cyclin (CYCD)
Gene families : OG0000252 (Archaeplastida) Phylogenetic Tree(s): OG0000252_tree ,
OG_05_0017989 (LandPlants) Phylogenetic Tree(s): OG_05_0017989_tree ,
OG_06_0017560 (SeedPlants) Phylogenetic Tree(s): OG_06_0017560_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e009441_P003 | |
| Cluster | HCCA: Cluster_125 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00065p00148150 | evm_27.TU.AmTr_v1... | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.03 | Archaeplastida | |
| AMTR_s00072p00074880 | evm_27.TU.AmTr_v1... | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.03 | Archaeplastida | |
| AMTR_s00135p00066200 | evm_27.TU.AmTr_v1... | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.03 | Archaeplastida | |
| AMTR_s00190p00017930 | evm_27.TU.AmTr_v1... | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.04 | Archaeplastida | |
| AT1G70210 | CYCD1;1, ATCYCD1;1 | CYCLIN D1;1 | 0.04 | Archaeplastida | |
| AT4G34160 | CYCD3, CYCD3;1 | CYCLIN D3;1 | 0.07 | Archaeplastida | |
| AT4G37630 | CYCD5;1 | cyclin d5;1 | 0.03 | Archaeplastida | |
| AT5G67260 | CYCD3;2 | CYCLIN D3;2 | 0.08 | Archaeplastida | |
| GSVIVT01000226001 | No alias | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.03 | Archaeplastida | |
| GSVIVT01000451001 | No alias | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.02 | Archaeplastida | |
| GSVIVT01003175001 | No alias | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.02 | Archaeplastida | |
| GSVIVT01003674001 | No alias | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.03 | Archaeplastida | |
| GSVIVT01009432001 | No alias | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.05 | Archaeplastida | |
| GSVIVT01037810001 | No alias | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.05 | Archaeplastida | |
| Gb_03361 | No alias | cyclin (CYCD) | 0.05 | Archaeplastida | |
| LOC_Os03g10650.1 | No alias | cyclin (CYCD) | 0.04 | Archaeplastida | |
| LOC_Os03g42070.1 | No alias | cyclin (CYCD) | 0.09 | Archaeplastida | |
| LOC_Os07g37010.1 | No alias | cyclin (CYCD) | 0.1 | Archaeplastida | |
| LOC_Os09g02360.1 | No alias | cyclin (CYCD) | 0.15 | Archaeplastida | |
| LOC_Os09g21450.1 | No alias | cyclin (CYCD) | 0.02 | Archaeplastida | |
| LOC_Os11g47950.1 | No alias | cyclin (CYCD) | 0.02 | Archaeplastida | |
| LOC_Os12g39830.1 | No alias | cyclin (CYCD) | 0.06 | Archaeplastida | |
| MA_10429174g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| MA_10429174g0030 | No alias | cyclin (CYCD) | 0.04 | Archaeplastida | |
| MA_10436212g0010 | No alias | cyclin (CYCD) | 0.02 | Archaeplastida | |
| MA_114375g0010 | No alias | cyclin (CYCD) | 0.06 | Archaeplastida | |
| MA_173888g0010 | No alias | cyclin (CYCD) | 0.01 | Archaeplastida | |
| MA_182921g0010 | No alias | cyclin (CYCD) | 0.01 | Archaeplastida | |
| MA_559426g0020 | No alias | cyclin (CYCD) | 0.03 | Archaeplastida | |
| MA_93221g0010 | No alias | cyclin (CYCD) | 0.06 | Archaeplastida | |
| Pp3c15_17470V3.1 | No alias | CYCLIN D1;1 | 0.02 | Archaeplastida | |
| Smo15078 | No alias | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.03 | Archaeplastida | |
| Smo412774 | No alias | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.04 | Archaeplastida | |
| Solyc01g107730.3.1 | No alias | cyclin (CYCD) | 0.01 | Archaeplastida | |
| Solyc02g079370.3.1 | No alias | cyclin (CYCD) | 0.03 | Archaeplastida | |
| Solyc02g092980.3.1 | No alias | cyclin (CYCD) | 0.03 | Archaeplastida | |
| Solyc04g078470.3.1 | No alias | cyclin (CYCD) | 0.04 | Archaeplastida | |
| Solyc05g006050.3.1 | No alias | cyclin (CYCD) | 0.03 | Archaeplastida | |
| Solyc07g054950.2.1 | No alias | cyclin (CYCD) | 0.03 | Archaeplastida | |
| Solyc12g088650.2.1 | No alias | cyclin (CYCD) | 0.03 | Archaeplastida | |
| Zm00001e034405_P005 | No alias | cyclin (CYCD) | 0.03 | Archaeplastida | |
| Zm00001e035215_P001 | No alias | cyclin (CYCD) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003713 | transcription coactivator activity | IEP | Neighborhood |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Neighborhood |
| MF | GO:0009055 | electron transfer activity | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0015035 | protein disulfide oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
| MF | GO:0017171 | serine hydrolase activity | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| MF | GO:0046983 | protein dimerization activity | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006671 | Cyclin_N | 76 | 182 |
| No external refs found! |