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  5. Zm00001e009589_P002

Zm00001e009589_P002


Description : Horcolin OS=Hordeum vulgare subsp. vulgare (sp|p82953|lech_horvv : 98.6)


Gene families : OG0000442 (Archaeplastida) Phylogenetic Tree(s): OG0000442_tree ,
OG_05_0002197 (LandPlants) Phylogenetic Tree(s): OG_05_0002197_tree ,
OG_06_0001312 (SeedPlants) Phylogenetic Tree(s): OG_06_0001312_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e009589_P002
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00183970 evm_27.TU.AmTr_v1... Jacalin-related lectin 19 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_24218 No alias Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g25160.1 No alias Salt stress-induced protein OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os01g51050.1 No alias Jacalin-related lectin 19 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os04g26320.1 No alias Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os10g04270.1 No alias Horcolin OS=Hordeum vulgare subsp. vulgare... 0.04 Archaeplastida
LOC_Os12g14440.1 No alias Salt stress-induced protein OS=Oryza sativa subsp.... 0.03 Archaeplastida
MA_10432048g0020 No alias Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_43124g0010 No alias Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_769268g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g121300.2.1 No alias Jacalin-related lectin 19 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e029549_P002 No alias Salt stress-induced protein OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e029550_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e033232_P001 No alias Horcolin OS=Hordeum vulgare subsp. vulgare... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004265 Dirigent 23 148
IPR001229 Jacalin-like_lectin_dom 189 314
No external refs found!