Zm00001e009632_P001

Description : subfamily ABCB transporter

Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0000418 (LandPlants) Phylogenetic Tree(s): OG_05_0000418_tree ,
OG_06_0000295 (SeedPlants) Phylogenetic Tree(s): OG_06_0000295_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e009632_P001
Cluster	HCCA: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method
AT1G27940	PGP13	P-glycoprotein 13	0.03	Archaeplastida
AT3G28360	PGP16	P-glycoprotein 16	0.03	Archaeplastida
LOC_Os01g52550.1	No alias	subfamily ABCB transporter	0.05	Archaeplastida
MA_10432922g0010	No alias	subfamily ABCB transporter	0.02	Archaeplastida
MA_10436810g0020	No alias	subfamily ABCB transporter	0.01	Archaeplastida
MA_6870g0010	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Mp3g11830.1	No alias	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.02	Archaeplastida
Pp3c1_7210V3.1	No alias	ATP binding cassette subfamily B19	0.01	Archaeplastida
Pp3c22_11240V3.1	No alias	P-glycoprotein 18	0.03	Archaeplastida
Smo139408	No alias	Solute transport.primary active transport.ABC...	0.01	Archaeplastida
Solyc02g087410.4.1	No alias	subfamily ABCB transporter	0.07	Archaeplastida
Zm00001e020073_P001	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Zm00001e026434_P002	No alias	subfamily ABCB transporter	0.06	Archaeplastida
Zm00001e041087_P002	No alias	subfamily ABCB transporter	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Neighborhood
MF	GO:0016874	ligase activity	IEP	Neighborhood
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	1013	1163
IPR011527	ABC1_TM_dom	32	303
IPR011527	ABC1_TM_dom	674	940
IPR003439	ABC_transporter-like	371	519

External Links

No external refs found!

Zm00001e009632_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation